RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 POLR3HQ9Y535 204 aaPredicted RBP10.89□□□□□ -0.67
MED28-203ENST00000503945 NAV3Q8IVL0 2385 aa10.89□□□□□ -0.67
MED28-203ENST00000503945 NINQ8N4C6 2090 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 PLOD2O00469 737 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 TSPAN2O60636 221 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 NME6O75414 186 aaPredicted RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 CTSSP25774 331 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 NTSP30990 170 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 OPRM1P35372 400 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 DLX5P56178 289 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 SRYQ05066 204 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 SLC18A2Q05940 514 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 ZNHIT3Q15649 155 aaPredicted RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 DECR1Q16698 335 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 SH2D4BQ5SQS7 431 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 OR5M10Q6IEU7 315 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 IKBIPQ70UQ0 350 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 CHMP1BQ7LBR1 199 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 TMEM200AQ86VY9 491 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 C10orf107Q8IVU9 208 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 C4orf33Q8N1A6 199 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 LRRN4CLQ8ND94 238 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 OR4N2Q8NGD1 307 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 EPS8L3Q8TE67 593 aaKnown RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 ELP4Q96EB1 424 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 TRMOQ9BU70 441 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 C12orf65Q9H3J6 166 aaKnown RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 L2HGDHQ9H9P8 463 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 MYNNQ9NPC7 610 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 C1orf109Q9NX04 203 aa10.88□□□□□ -0.67
MED28-203ENST00000503945 MAP1AP78559 2803 aaPredicted RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 ZNF469Q96JG9 3925 aaPredicted RBP10.88□□□□□ -0.67
MED28-203ENST00000503945 UPK1AO00322 258 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 AZIN1O14977 448 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 CD99P14209 185 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 SRD5A2P31213 254 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 DGKQP52824 942 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 IST1P53990 364 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 PSMD4P55036 377 aaKnown RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 EEF1A1P68104 462 aaKnown RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 PSG6Q00889 435 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 IFFO1Q0D2I5 559 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 GAB1Q13480 694 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 KIAA0040Q15053 153 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 PRSS53Q2L4Q9 553 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 EEF1A1P5Q5VTE0 462 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 CLEC6AQ6EIG7 209 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 TMEM107Q6UX40 140 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 IFNEQ86WN2 208 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 KIF18BQ86Y91 864 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 RNASE6Q93091 150 aaKnown RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 EFHD2Q96C19 240 aaPredicted RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 AMDHD1Q96NU7 426 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 TM9SF2Q99805 663 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 GATA5Q9BWX5 397 aaPredicted RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 GLIPR2Q9H4G4 154 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 C3orf14Q9HBI5 128 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 LRTM1Q9HBL6 345 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 EML4Q9HC35 981 aaKnown RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 Q9N2J8 555 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 DDX18Q9NVP1 670 aaKnown RBP10.87□□□□□ -0.67
MED28-203ENST00000503945 SH3BP4Q9P0V3 963 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 CBLCQ9ULV8 474 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 WIF1Q9Y5W5 379 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 AKAP6Q13023 2319 aa10.87□□□□□ -0.67
MED28-203ENST00000503945 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
MED28-203ENST00000503945 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 TTC36A6NLP5 189 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 H0Y3Z8 333 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ZIC3O60481 467 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 IL18BPO95998 194 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 FGF4P08620 206 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 FREM3P0C091 2139 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 LINC00032P0C843 101 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 HOXB4P17483 251 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 PRPH2P23942 346 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 CHMP24386 653 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 GRK2P25098 689 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 DPP4P27487 766 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 GPC1P35052 558 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 MC3RP41968 323 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 STARP49675 285 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ASCL1P50553 236 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 AGFG1P52594 562 aaKnown RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 MANFP55145 182 aaKnown RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 DSCR4P56555 118 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 WNT3P56703 355 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ZNF155Q12901 538 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 SNTB1Q13884 538 aaKnown RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 NPSR1Q6W5P4 371 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 Q6ZSR9 355 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ZZZ3Q8IYH5 903 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 OR2L13Q8N349 312 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 NAXEQ8NCW5 288 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms