RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 PROK2Q9HC23 129 aa15.39■□□□□ 0.05
PRKCB-210ENST00000498739 NPIPA1Q9UND3 350 aa15.39■□□□□ 0.05
PRKCB-210ENST00000498739 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.39■□□□□ 0.05
PRKCB-210ENST00000498739 RNF103-CHMP3A0A140T963 221 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 GXYLT2A0PJZ3 443 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 ANKRD33BA6NCL7 494 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 ANKUB1A6NFN9 424 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 FAM166BA8MTA8 275 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 HS6ST1O60243 411 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 ABCB7O75027 752 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 KCNH1O95259 989 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 CBX6O95503 412 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 IL6P05231 212 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 MAP3K8P41279 467 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 CASP3P42574 277 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 POLR2JP52435 117 aaKnown RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 PNLIPRP2P54317 469 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 EFR3AQ14156 821 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 DUSP5Q16690 384 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 ZCCHC12Q6PEW1 402 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 BHLHB9Q6PI77 547 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 STON2Q8WXE9 905 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 HOXB13Q92826 284 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 RMND5BQ96G75 393 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 JSRP1Q96MG2 331 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 CCDC115Q96NT0 180 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 IL1RL2Q9HB29 575 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 KLRF1Q9NZS2 232 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 SEC14L3Q9UDX4 400 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 BTNL2Q9UIR0 455 aa15.38■□□□□ 0.05
PRKCB-210ENST00000498739 MRTO4Q9UKD2 239 aaKnown RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 BOKQ9UMX3 212 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 FAF1Q9UNN5 650 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-210ENST00000498739 WISP2O76076 250 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 UNC5CO95185 931 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 CYP4B1P13584 511 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 NCF2P19878 526 aaPredicted RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 UQCRC2P22695 453 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 ZFP36L2P47974 494 aaKnown RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 MRPL19P49406 292 aaKnown RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 PSMD4P55036 377 aaKnown RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 PPIAP62937 165 aaKnown RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 MRPS22P82650 360 aaKnown RBP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 LRRC74AQ0VAA2 488 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 SF3A3Q12874 501 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRKCB-210ENST00000498739 TIGD2Q4W5G0 525 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 CDC73Q6P1J9 531 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 GFRALQ6UXV0 394 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 C6orf120Q7Z4R8 191 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 SLC22A16Q86VW1 577 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 SIAH3Q8IW03 269 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 COX18Q8N8Q8 333 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 ADAMTS15Q8TE58 950 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 ZNF597Q96LX8 424 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 GPR137Q96N19 417 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 PANX1Q96RD7 426 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 INPP5KQ9BT40 448 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 OSBPL11Q9BXB4 747 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 ANGPTL4Q9BY76 406 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 ACTRT3Q9BYD9 372 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 GPATCH2Q9NW75 528 aa15.37■□□□□ 0.05
PRKCB-210ENST00000498739 FAM234BA2RU67 622 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 PRAMEF25A6NGN4 478 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 SNX4O95219 450 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 IL33O95760 270 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 KRT16P08779 473 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 MASP1P48740 699 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 KCNK10P57789 538 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 FOXO1Q12778 655 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 SQLEQ14534 574 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 EXOSC6Q5RKV6 272 aaKnown RBP15.36■□□□□ 0.05
PRKCB-210ENST00000498739 CGB2Q6NT52 195 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 TMEM81Q6P7N7 255 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 PACS2Q86VP3 889 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 TMEM251Q8N6I4 163 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 OR52N2Q8NGI0 321 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 CDS1Q92903 461 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 SLC35G5Q96KT7 338 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 STACQ99469 402 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 PIGUQ9H490 435 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 GALNT9Q9HCQ5 603 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 ZFP64Q9NPA5 681 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 CCDC167Q9P0B6 97 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
PRKCB-210ENST00000498739 C2orf72A6NCS6 295 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 LRRC3CA6NJW4 275 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 ASNA1O43681 348 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 CDC40O60508 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRKCB-210ENST00000498739 ICOSLGO75144 302 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 TRIM3O75382 744 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-210ENST00000498739 GLSO94925 669 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-210ENST00000498739 IGKV1D-16P01601 117 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 MATN1P21941 496 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 CHI3L1P36222 383 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-210ENST00000498739 PTGDSP41222 190 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 CDKN2CP42773 168 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 MAGEA5P43359 124 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 ATP4BP51164 291 aa15.35■□□□□ 0.05
PRKCB-210ENST00000498739 ARFIP2P53365 341 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms