RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 MAGEA2P43356 314 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 YAP1P46937 504 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 HSPA13P48723 471 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 AQP4P55087 323 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC37A1P57057 533 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PSG6Q00889 435 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 KCNC4Q03721 635 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 FOXD4Q12950 439 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 EIF3IQ13347 325 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 LARS2Q15031 903 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 NNATQ16517 81 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 OTUD3Q5T2D3 398 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 TYW3Q6IPR3 259 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PPP4R4Q6NUP7 873 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 C6orf15Q6UXA7 325 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 FRRS1Q6ZNA5 592 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC29A4Q7RTT9 530 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 GLRX5Q86SX6 157 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLCO6A1Q86UG4 719 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 STK32CQ86UX6 486 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 CARM1Q86X55 608 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 VRK2Q86Y07 508 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 HIPK1Q86Z02 1210 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF619Q8N2I2 560 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SVOPLQ8N434 492 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PACRGLQ8N7B6 248 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF321PQ8N8H1 164 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 MORN4Q8NDC4 146 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 GPR32P1Q8NGA4 272 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 OR5K1Q8NHB7 308 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 WDR36Q8NI36 951 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 C7orf34Q96L11 122 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF354BQ96LW1 612 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 VSTM2LQ96N03 204 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 LRFN5Q96NI6 719 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC46A1Q96NT5 459 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 GAL3ST4Q96RP7 486 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PIP5K1AQ99755 562 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 G6PC3Q9BUM1 346 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 DDA1Q9BW61 102 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 NUDT9Q9BW91 350 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PINK1Q9BXM7 581 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 ITPAQ9BY32 194 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 AMBRA1Q9C0C7 1298 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC26A1Q9H2B4 701 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC38A1Q9H2H9 487 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 ARMC7Q9H6L4 198 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 WDR54Q9H977 334 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 AKIRIN1Q9H9L7 192 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 NTN4Q9HB63 628 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 C8orf4Q9NR00 106 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 POLE3Q9NRF9 147 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 THSD1Q9NS62 852 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 FBXO34Q9NWN3 711 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 TOR4AQ9NXH8 423 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 KLHL28Q9NXS3 571 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 NDUFAF4Q9P032 175 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 C19orf25Q9UFG5 118 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 CNOT11Q9UKZ1 510 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PADI1Q9ULC6 663 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 DTX4Q9Y2E6 619 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SLC9A8Q9Y2E8 581 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 IFT52Q9Y366 437 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 PTRH2Q9Y3E5 179 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 SAMHD1Q9Y3Z3 626 aaKnown RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 TESMINQ9Y4I5 508 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 LRRC42Q9Y546 428 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 U3KQV3 271 aa6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 COL5A1P20908 1838 aaPredicted RBP6.6□□□□□ -1.35
GPATCH4-209ENST00000498641 DSPPQ9NZW4 1301 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 TEX51A0A1B0GUA7 166 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PMS2P1A4D2B8 440 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 OR6C76A6NM76 312 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 H0YJX3 145 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 TNFRSF11BO00300 401 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 EI24O14681 340 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ADAMDEC1O15204 470 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ACOX3O15254 700 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CNOT3O75175 753 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PRSS23O95084 383 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 RASAL1O95294 804 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DDAH2O95865 285 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CLPSP04118 112 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 IGKV3-11P04433 115 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DBIP07108 87 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CYC1P08574 325 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CD63P08962 238 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 FTH1P19P0C7X4 201 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CT45A8P0DMV1 189 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CT45A9P0DMV2 189 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ACADSP16219 412 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF26P17031 533 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 RHCEP18577 417 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DRD5P21918 477 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PRKAR1BP31321 381 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 RRM2P31350 389 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms