RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 TRPC4Q9UBN4 977 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 SNX11Q9Y5W9 270 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 FEZF1A0PJY2 475 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 PRSS38A1L453 326 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 GSAPA4D1B5 854 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 SCAMP1O15126 338 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TPST2O60704 377 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 KCNK2O95069 426 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 SOX14O95416 240 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TP53P04637 393 aaPredicted RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 CPEP16870 476 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 PKLRP30613 574 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TNFSF8P32971 234 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 RABIFP47224 123 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 YPEL5P62699 121 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 EFNB1P98172 346 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TGM3Q08188 693 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 SYPL1Q16563 259 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 ALG11Q2TAA5 492 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 ATAD3BQ5T9A4 648 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 ZNF544Q6NX49 715 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 HSDL2Q6YN16 418 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TMPRSS11AQ6ZMR5 421 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 PHC2Q8IXK0 858 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 FAM83FQ8NEG4 500 aaPredicted RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 AP3S1Q92572 193 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 KIAA1143Q96AT1 154 aaPredicted RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 COQ7Q99807 217 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 DUSP15Q9H1R2 295 aaPredicted RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 SERHL2Q9H4I8 314 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 TVP23BQ9NYZ1 205 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 SLC13A4Q9UKG4 626 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 FBXO4Q9UKT5 387 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 ENTPD4Q9Y227 616 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
AFF3-215ENST00000498090 PLEKHM1Q9Y4G2 1056 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 MUC6Q6W4X9 2439 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 PCM1Q15154 2024 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 CACNA1IQ9P0X4 2223 aa11.66□□□□□ -0.54
AFF3-215ENST00000498090 HTR3EA5X5Y0 456 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 FAM227AF5H4B4 570 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 PRODHO43272 600 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 TLX2O43763 284 aaPredicted RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 AGR2O95994 175 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 THEGLP0DJG4 465 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 GAAP10253 952 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 ACP2P11117 423 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 TNNI3P19429 210 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 HIST1H1TP22492 207 aaPredicted RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 MMP11P24347 488 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 GTF2E2P29084 291 aaKnown RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 RPS19P39019 145 aaKnown RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 PIN1Q13526 163 aaPredicted RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 GINS1Q14691 196 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 NDUFA5Q16718 116 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 SYT14P1Q58G82 188 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 MRM1Q6IN84 353 aaKnown RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 GDPD3Q7L5L3 318 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 ADCK2Q7Z695 626 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 ZER1Q7Z7L7 766 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 FAM181AQ8N9Y4 354 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 LINC01555Q8NAE3 123 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 MORN4Q8NDC4 146 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 OR4D11Q8NGI4 311 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 OR2A1Q8NGT9 310 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 TEX47Q8TBZ9 253 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 TMEM163Q8TC26 289 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 DNASE2BQ8WZ79 361 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 TSACCQ96A04 125 aaPredicted RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 SLC25A46Q96AG3 418 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 C12orf66Q96MD2 445 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 ZNF582Q96NG8 517 aaPredicted RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 LYARQ9NX58 379 aaKnown RBP11.65□□□□□ -0.54
AFF3-215ENST00000498090 QPCTLQ9NXS2 382 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 CMAHPQ9Y471 501 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
AFF3-215ENST00000498090 PRR19A6NJB7 356 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 EMC8O43402 210 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 HRO43593 1189 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 ADRA2AP08913 450 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 TRAPPC2P0DI81 140 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 TRAPPC2BP0DI82 140 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 DMDP11532 3685 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 ACP5P13686 325 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 CSNK2A2P19784 350 aaPredicted RBP11.65□□□□□ -0.55
AFF3-215ENST00000498090 FUT4P22083 530 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 PSMB5P28074 263 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 MPIP34949 423 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 WNT4P56705 351 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 PSPHP78330 225 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 ST3GAL3Q11203 375 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 TCF15Q12870 199 aa11.65□□□□□ -0.55
AFF3-215ENST00000498090 EIF2B5Q13144 721 aaKnown RBP11.65□□□□□ -0.55
AFF3-215ENST00000498090 FZD2Q14332 565 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms