RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 EFCAB1Q9HAE3 211 aa18.49■□□□□ 0.55
CTSD-206ENST00000497544 PLA2G3Q9NZ20 509 aa18.49■□□□□ 0.55
CTSD-206ENST00000497544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.49■□□□□ 0.55
CTSD-206ENST00000497544 TUBD1Q9UJT1 453 aa18.49■□□□□ 0.55
CTSD-206ENST00000497544 PCDHGB3Q9Y5G1 929 aa18.49■□□□□ 0.55
CTSD-206ENST00000497544 NPFFR2Q9Y5X5 522 aa18.49■□□□□ 0.55
CTSD-206ENST00000497544 CPAMD8Q8IZJ3 1885 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 SPENQ96T58 3664 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 A8MVJ9 347 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 CDK2AP1O14519 115 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 AIM2O14862 343 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 TO15178 435 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 NKX2-2O95096 273 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 WDPCPO95876 746 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 NPPAP01160 153 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 PPIBP23284 216 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 KRT20P35900 424 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 ST13P50502 369 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 CASP9P55211 416 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 PSPHP78330 225 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 ARG2P78540 354 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 ART3Q13508 389 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 CYP27C1Q4G0S4 372 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 IL20RBQ6UXL0 311 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 RNF130Q86XS8 419 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 PTRH1Q86Y79 214 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 PRR22Q8IZ63 422 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 ZADH2Q8N4Q0 377 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 PNPT1Q8TCS8 783 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 HAS2Q92819 552 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 HOXB13Q92826 284 aaPredicted RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 OTUB1Q96FW1 271 aaPredicted RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 SLC35A4Q96G79 324 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 AURKBQ96GD4 344 aaPredicted RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 OR7D2Q96RA2 312 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 STACQ99469 402 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 OR51I1Q9H343 314 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 PIGUQ9H490 435 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 RAD21L1Q9H4I0 556 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 ZBTB20Q9HC78 741 aaPredicted RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 HPF1Q9NWY4 346 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 GIN1Q9NXP7 522 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 SLC25A37Q9NYZ2 338 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 VAPAQ9P0L0 249 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 TAGLN3Q9UI15 199 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 MRTO4Q9UKD2 239 aaKnown RBP18.48■□□□□ 0.55
CTSD-206ENST00000497544 CBLCQ9ULV8 474 aa18.48■□□□□ 0.55
CTSD-206ENST00000497544 EVPLLA8MZ36 301 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 REM1O75628 298 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 NADKO95544 446 aaPredicted RBP18.47■□□□□ 0.55
CTSD-206ENST00000497544 F10P00742 488 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 SOX3P41225 446 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 MAP3K8P41279 467 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 CYB561P49447 251 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 HLCSP50747 726 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 RPS26P62854 115 aaKnown RBP18.47■□□□□ 0.55
CTSD-206ENST00000497544 TXNL4AP83876 142 aaKnown RBP18.47■□□□□ 0.55
CTSD-206ENST00000497544 PLCXD2Q0VAA5 305 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 DUSP5Q16690 384 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 RUNDC3AQ59EK9 446 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 TNFAIP8L2Q6P589 184 aaPredicted RBP18.47■□□□□ 0.55
CTSD-206ENST00000497544 IGFL2Q6UWQ7 119 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 NPSR1Q6W5P4 371 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 TRPM8Q7Z2W7 1104 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 HPS6Q86YV9 775 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 SLC34A3Q8N130 599 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 COX18Q8N8Q8 333 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 C9orf43Q8TAL5 461 aaPredicted RBP18.47■□□□□ 0.55
CTSD-206ENST00000497544 MIPOL1Q8TD10 442 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 XAGE5Q8WWM1 108 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 LRRC58Q96CX6 371 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 CGREF1Q99674 301 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 RNF32Q9H0A6 362 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 DUSP22Q9NRW4 184 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 ARL8BQ9NVJ2 186 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 ANKRD10Q9NXR5 420 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 CSMD1Q96PZ7 3565 aa18.47■□□□□ 0.55
CTSD-206ENST00000497544 OR5H15A6NDH6 313 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 ZNF354AO60765 605 aaPredicted RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 OR6B1O95007 311 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 UNC5CO95185 931 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 AGR2O95994 175 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 C1QCP02747 245 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 OR12D1P0DN82 309 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 NAGAP17050 411 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 HOXB9P17482 250 aaPredicted RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 ABCD3P28288 659 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 TRHRP34981 398 aaPredicted RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 CD96P40200 585 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 CRATP43155 626 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 TMED10P49755 219 aaKnown RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 KHKP50053 298 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 POU6F2P78424 691 aaPredicted RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 KRT72Q14CN4 511 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 DECR1Q16698 335 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 TRMT5Q32P41 509 aaKnown RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 ASB18Q6ZVZ8 466 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 MSRB3Q8IXL7 192 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 GPALPP1Q8IXQ4 340 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 DND1Q8IYX4 353 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms