RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.53
FN1-226ENST00000496542 FOXD3Q9UJU5 478 aaPredicted RBP11.77□□□□□ -0.53
FN1-226ENST00000496542 CBLCQ9ULV8 474 aa11.77□□□□□ -0.53
FN1-226ENST00000496542 POLR3HQ9Y535 204 aaPredicted RBP11.77□□□□□ -0.53
FN1-226ENST00000496542 SMIM23A6NLE4 172 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 CLCA1A8K7I4 914 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 C17orf51A8MQB3 221 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 G3V2L1 256 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 SCO2O43819 266 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 PLOD3O60568 738 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 COQ9O75208 318 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 GLRA3O75311 464 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 JUNP05412 331 aaKnown RBP11.76□□□□□ -0.53
FN1-226ENST00000496542 CPN1P15169 458 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 GRK2P25098 689 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 NTSP30990 170 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 SRD5A2P31213 254 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 MC3RP41968 323 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 GSTM5P46439 218 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 STARP49675 285 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 CEBPEQ15744 281 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 PRSS53Q2L4Q9 553 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 FBXW10Q5XX13 1052 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 TMEM107Q6UX40 140 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 FRMD7Q6ZUT3 714 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 KIF18BQ86Y91 864 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 OR4K17Q8NGC6 315 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
FN1-226ENST00000496542 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 SHCBP1LQ9BZQ2 653 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 STMN4Q9H169 189 aaPredicted RBP11.76□□□□□ -0.53
FN1-226ENST00000496542 MIEF1Q9NQG6 463 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 CCM2LQ9NUG4 571 aaPredicted RBP11.76□□□□□ -0.53
FN1-226ENST00000496542 TAS2R9Q9NYW1 312 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 ST6GALNAC2Q9UJ37 374 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 RPH3AQ9Y2J0 694 aaPredicted RBP11.76□□□□□ -0.53
FN1-226ENST00000496542 PCNX3Q9H6A9 2034 aa11.76□□□□□ -0.53
FN1-226ENST00000496542 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 TUBAL3A6NHL2 446 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 MYO1GB0I1T2 1018 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 IL18BPO95998 194 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 PROCP04070 461 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 DPP4P27487 766 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 CPA2P48052 419 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 LHX2P50458 406 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 GFRA1P56159 465 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 PSPHP78330 225 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 MRPS22P82650 360 aaKnown RBP11.75□□□□□ -0.53
FN1-226ENST00000496542 FOXF2Q12947 444 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 STX5Q13190 355 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 FAM71E1Q6IPT2 247 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 AAGABQ6PD74 315 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 CDC20BQ86Y33 519 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 GCNT2Q8N0V5 402 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 CCDC63Q8NA47 563 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 LINC01560Q8TB33 94 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 NINJ1Q92982 152 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 INTS12Q96CB8 462 aaKnown RBP11.75□□□□□ -0.53
FN1-226ENST00000496542 TM9SF2Q99805 663 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 SFXN3Q9BWM7 321 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 MYNNQ9NPC7 610 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 SIRT5Q9NXA8 310 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 PPP4R1LQ9P1A2 415 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 PLEKHA6Q9Y2H5 1048 aa11.75□□□□□ -0.53
FN1-226ENST00000496542 FAM221AA4D161 298 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 B4DXG7 233 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 PLOD2O00469 737 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 PLIN3O60664 434 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 SHBGP04278 402 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 DNASE1P24855 282 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 EVI2BP34910 448 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 RFX3P48380 749 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 GAS1P54826 345 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 SORDQ00796 357 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 CCDC153Q494R4 210 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 LUZP2Q86TE4 346 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 GRAMD2AQ8IUY3 354 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 CNPY4Q8N129 248 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 LRRN4CLQ8ND94 238 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 RNF138Q8WVD3 245 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 UBLCP1Q8WVY7 318 aaPredicted RBP11.74□□□□□ -0.53
FN1-226ENST00000496542 WNT2BQ93097 391 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 ZFP3Q96NJ6 502 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 G6PC3Q9BUM1 346 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 RBM24Q9BX46 236 aaKnown RBP11.74□□□□□ -0.53
FN1-226ENST00000496542 C12orf65Q9H3J6 166 aaKnown RBP11.74□□□□□ -0.53
FN1-226ENST00000496542 DSN1Q9H410 356 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 GLIPR2Q9H4G4 154 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 TNFRSF12AQ9NP84 129 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 DDX18Q9NVP1 670 aaKnown RBP11.74□□□□□ -0.53
FN1-226ENST00000496542 FLRT3Q9NZU0 649 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 JKAMPQ9P055 326 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 CLCF1Q9UBD9 225 aa11.74□□□□□ -0.53
FN1-226ENST00000496542 C19orf53Q9UNZ5 99 aaPredicted RBP11.74□□□□□ -0.53
FN1-226ENST00000496542 A0A087WV62 115 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 H3BQF6 201 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms