RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 FIS1Q9Y3D6 152 aa14.34□□□□□ -0.11
HDAC4-213ENST00000496347 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 HSPB2A8KAH6 182 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 UPK1AO00322 258 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 PDPK1O15530 556 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 TBX19O60806 448 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 CBR3O75828 277 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 DDX5P17844 614 aaKnown RBP14.33□□□□□ -0.12
HDAC4-213ENST00000496347 TACR1P25103 407 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ASMTP46597 345 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 PDE7AQ13946 482 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ZNHIT3Q15649 155 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-213ENST00000496347 HSPB2Q16082 182 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 PRSS53Q2L4Q9 553 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ARL13AQ5H913 290 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-213ENST00000496347 DESI1Q6ICB0 168 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 Q6ZSR9 355 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 LURAP1LQ8IV03 231 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 DDIASQ8IXT1 998 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 WDSUB1Q8N9V3 476 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 PPCDCQ96CD2 204 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ELP4Q96EB1 424 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ZBED6CLQ96FA7 236 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-213ENST00000496347 LURAP1Q96LR2 239 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 MECRQ9BV79 373 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 UGT2B28Q9BY64 529 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 Q9N2J8 555 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 SERHLQ9NQF3 203 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 ALKBH4Q9NXW9 302 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 MAPRE3Q9UPY8 281 aa14.33□□□□□ -0.12
HDAC4-213ENST00000496347 SPAG7O75391 227 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 BMP7P18075 431 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 MAPK1P28482 360 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 EVI2BP34910 448 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 TIMP3P35625 211 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 EIPR1Q53HC9 387 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 XKR7Q5GH72 579 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 WIPI1Q5MNZ9 446 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-213ENST00000496347 SH2D4BQ5SQS7 431 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 NSUN5P2Q63ZY6 315 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 IFNEQ86WN2 208 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 PLCZ1Q86YW0 608 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 CLYBLQ8N0X4 340 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 ABTB1Q969K4 478 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-213ENST00000496347 EFHD2Q96C19 240 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-213ENST00000496347 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 LMF2Q9BU23 707 aaKnown RBP14.32□□□□□ -0.12
HDAC4-213ENST00000496347 UCK2Q9BZX2 261 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 MRTO4Q9UKD2 239 aaKnown RBP14.32□□□□□ -0.12
HDAC4-213ENST00000496347 SLC6A5Q9Y345 797 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
HDAC4-213ENST00000496347 CD8B2A6NJW9 211 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 TMEM114B3SHH9 223 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 TMEM233B4DJY2 109 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 DVL2O14641 736 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 PIP5K1BO14986 540 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 TYROBPO43914 113 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 NME6O75414 186 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 EPPINO95925 133 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 LINC00032P0C843 101 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 GRK2P25098 689 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 SRD5A2P31213 254 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 HPCAL1P37235 193 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 RPL3P39023 403 aaKnown RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 PEX19P40855 299 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 FRKP42685 505 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 PSMD4P55036 377 aaKnown RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 HSPB3Q12988 150 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 RCAN2Q14206 197 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 DECR1Q16698 335 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 UGT3A2Q3SY77 523 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 RFTN2Q52LD8 501 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 DCST1Q5T197 706 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 ENPP6Q6UWR7 440 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 SEM1Q6ZVN7 128 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 R3HCC1LQ7Z5L2 792 aaKnown RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 DMRTC2Q8IXT2 367 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 OR14L1PQ8NHC6 308 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 HOXB13Q92826 284 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 PPP3R2Q96LZ3 170 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 MS4A4EQ96PG1 132 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 TSSK3Q96PN8 268 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 C3orf14Q9HBI5 128 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 MCCC2Q9HCC0 563 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 ACSS1Q9NUB1 689 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 FAM120CQ9NX05 1096 aaKnown RBP14.31□□□□□ -0.12
HDAC4-213ENST00000496347 TAS2R10Q9NYW0 307 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 KCNN3Q9UGI6 736 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 DKKL1Q9UK85 242 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 CBLCQ9ULV8 474 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 CAMK2AQ9UQM7 478 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 AKAP9Q99996 3911 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 KIAA1549Q9HCM3 1950 aa14.31□□□□□ -0.12
HDAC4-213ENST00000496347 BPGMP07738 259 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 CYP4B1P13584 511 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 CPN1P15169 458 aa14.3□□□□□ -0.12
HDAC4-213ENST00000496347 CEACAM8P31997 349 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms