RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SMC3Q9UQE7 1217 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 NIP7Q9Y221 180 aaKnown RBP eCLIP3.16□□□□□ -1.9
CLTC-208ENST00000496076 VSIG4Q9Y279 399 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 RNF115Q9Y4L5 304 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 CUX2O14529 1486 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 KDRP35968 1356 aa3.15□□□□□ -1.9
CLTC-208ENST00000496076 SYNJ2BP-COX16A0A087WUM0 186 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 RNF222A6NCQ9 220 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZNF724A8MTY0 619 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 A8MUI8 341 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 WASH3PC4AMC7 463 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 FBP2O00757 339 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 EI24O14681 340 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 BUB1O43683 1085 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 RANBP6O60518 1105 aaKnown RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 CEACAM4O75871 244 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 TM7SF2O76062 418 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 POP4O95707 220 aaKnown RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 HPP00738 406 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 OAS1P00973 400 aaKnown RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 CSF2P04141 144 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 KRT8P05787 483 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ADORA3P0DMS8 318 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 MYOGP15173 224 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 EDNRAP25101 427 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 AXLP30530 894 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 OXTRP30559 389 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 FCGR2CP31995 323 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 METAP1P53582 386 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 PPIAP62937 165 aaKnown RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 NDPQ00604 133 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 FCHO2Q0JRZ9 810 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZNF177Q13360 481 aaPredicted RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 ITPK1Q13572 414 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 KIAA0141Q14154 515 aaPredicted RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 EMC2Q15006 297 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 PDK4Q16654 411 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 CCDC152Q4G0S7 254 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZNF311Q5JNZ3 666 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 CFAP157Q5JU67 520 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 PNCKQ6P2M8 343 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 NIPAL3Q6P499 406 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 SLC39A4Q6P5W5 647 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 LRRC8BQ6P9F7 803 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 CBLN3Q6UW01 205 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 LCLAT1Q6UWP7 414 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 WASH2PQ6VEQ5 465 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 GDPGP1Q6ZNW5 385 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 GPR142Q7Z601 462 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 TMEM110Q86TL2 294 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 CBWD2Q8IUF1 395 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 CCDC36Q8IYA8 594 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 OR52M1Q8NGK5 317 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 OR52J3Q8NH60 311 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 NPRL2Q8WTW4 380 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 PINX1Q96BK5 328 aaKnown RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZIM3Q96PE6 472 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 GPA33Q99795 319 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 TBCDQ9BTW9 1192 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 ZSCAN5AQ9BUG6 496 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 LIME1Q9H400 295 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 TUBB1Q9H4B7 451 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 NT5DC2Q9H857 520 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 FAM114A2Q9NRY5 505 aa3.15□□□□□ -1.91
CLTC-208ENST00000496076 SMPD3Q9NY59 655 aaPredicted RBP3.15□□□□□ -1.91
CLTC-208ENST00000496076 SF3B1O75533 1304 aaKnown RBP eCLIP3.15□□□□□ -1.91
CLTC-208ENST00000496076 TTC26A0AVF1 554 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 IGLON5A6NGN9 336 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 E9PMD0 336 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 H3BTX0 84 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 K7EQD1 137 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 K7EQM0 130 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 SGK494L7N484 410 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 IMPA2O14732 288 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 CASKO14936 926 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 GALR3O60755 368 aaPredicted RBP3.14□□□□□ -1.91
CLTC-208ENST00000496076 SDC3O75056 442 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 HMMRO75330 724 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 KIAA0754O94854 1291 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 MFN2O95140 757 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 NDUFA7O95182 113 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 OR9G9P0C7N8 305 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 SLC35G4P0C7Q5 338 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 GLRA2P23416 452 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 CALML3P27482 149 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 ETV5P41161 510 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 NDST2P52849 883 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 ERVK-16P61578 105 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 LYZP61626 148 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 MRPS6P82932 125 aaKnown RBP3.14□□□□□ -1.91
CLTC-208ENST00000496076 CHIT1Q13231 466 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 CAMK4Q16566 473 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 ACSF3Q4G176 576 aaPredicted RBP3.14□□□□□ -1.91
CLTC-208ENST00000496076 RABGAP1LQ5R372 815 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 KHDRBS2Q5VWX1 349 aaKnown RBP3.14□□□□□ -1.91
CLTC-208ENST00000496076 PAQR9Q6ZVX9 377 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 VASH2Q86V25 355 aa3.14□□□□□ -1.91
CLTC-208ENST00000496076 FAM131BQ86XD5 332 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms