RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZNF595Q8IYB9 648 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 SPARTQ8N0X7 666 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CA13Q8N1Q1 262 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ZNF619Q8N2I2 560 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 OR2L13Q8N349 312 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 OR9Q2Q8NGE9 314 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 OR13F1Q8NGS4 319 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 OR52P1PQ8NH57 321 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PIGXQ8TBF5 258 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 GNPDA2Q8TDQ7 276 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 RLN3Q8WXF3 142 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 KAT2AQ92830 837 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 MUL1Q969V5 352 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 GTPBP3Q969Y2 492 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 CRELD1Q96HD1 420 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DHRS1Q96LJ7 313 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 C10orf90Q96M02 699 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ZNF681Q96N22 645 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DGAT2Q96PD7 388 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 FCRL4Q96PJ5 515 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 YIPF4Q9BSR8 244 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 COPS4Q9BT78 406 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DGCR6LQ9BY27 220 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 RAB33BQ9H082 229 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 TCEAL2Q9H3H9 227 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 PIGUQ9H490 435 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 MTHFD2LQ9H903 347 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 ADAP2Q9NPF8 381 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DUSP22Q9NRW4 184 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PLCXD1Q9NUJ7 323 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ACER3Q9NUN7 267 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 NTMQ9P121 344 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CHD7Q9P2D1 2997 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 SUSD2Q9UGT4 822 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ACAD8Q9UKU7 415 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 RALGAPA1Q6GYQ0 2036 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 SPTBP11277 2137 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CDH23Q9H251 3354 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 A0A1B0GTW7 788 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 A0A1W2PNR3 127 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 A0A1W2PR77 199 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ZNF860A6NHJ4 632 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ZAR1LA6NP61 321 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 WASHC1A8K0Z3 465 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TMEM150CB9EJG8 249 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 LMO7DNF2Z398 122 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 J3KTA2 159 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 M0R3H8 397 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SLC22A1O15245 554 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 YKT6O15498 198 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PLOD3O60568 738 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PRAMEF2O60811 474 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 RDH16O75452 317 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SEC14L2O76054 403 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 OR5F1O95221 314 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 NSA2O95478 260 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 ZBTB11O95625 1053 aaPredicted RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 CHRM4P08173 479 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SLC35E2P0CK97 266 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ST6GAL1P15907 406 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 AGXTP21549 392 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PSMB9P28065 219 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 POU1F1P28069 291 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 LIMS1P48059 325 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CXCL12P48061 93 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 GSSP48637 474 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ARRB1P49407 418 aaPredicted RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 AFF3P51826 1226 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 SMSP52788 366 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 NXPH1P58417 271 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SLC35A2P78381 396 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 GPLD1P80108 840 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TFF2Q03403 129 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 OCA2Q04671 838 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TARDBPQ13148 414 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP39-219ENST00000496047 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 C1DQ13901 141 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 RUNX2Q13950 521 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SERTAD2Q14140 314 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 FAM53BQ14153 422 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 GRM7Q14831 915 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 LTB4RQ15722 352 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TBCEQ15813 527 aaPredicted RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 NPTX1Q15818 432 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CTU2Q2VPK5 515 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 TIMM50Q3ZCQ8 353 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CYP27C1Q4G0S4 372 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 IQCCQ4KMZ1 466 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ZNF628Q5EBL2 1059 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 DCST2Q5T1A1 773 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 MLIPQ5VWP3 458 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 MEDAGQ5VYS4 303 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 HEPHL1Q6MZM0 1159 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 RPL13AP3Q6NVV1 102 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ZNF730Q6ZMV8 503 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 AHSA2Q719I0 299 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms