RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CCL4L1Q8NHW4 92 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 FLVCR1-AS1Q8TAF5 88 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 TMEM163Q8TC26 289 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SERINC2Q96SA4 455 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 ASPNQ9BXN1 380 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 C6orf106Q9H6K1 298 aaPredicted RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 QPCTLQ9NXS2 382 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 KLHL3Q9UH77 587 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 TRBV23OR9-2A0A075B6M9 112 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 IRGMA1A4Y4 181 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 RFXAPO00287 272 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 NARSO43776 548 aaKnown RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 UBXN7O94888 489 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 ZIC2O95409 532 aaPredicted RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 MAGP20916 626 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 CTHP32929 405 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 CRYBB2P43320 205 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 AVPR1BP47901 424 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PDX1P52945 283 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PAQR6Q6TCH4 344 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 RASSF6Q6ZTQ3 369 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PRICKLE2Q7Z3G6 844 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 MEX3DQ86XN8 651 aaKnown RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 OR4K14Q8NGD5 310 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PIGXQ8TBF5 258 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 TM4SF19Q96DZ7 209 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SLC38A2Q96QD8 506 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 OR2A14Q96R47 310 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SAP130Q9H0E3 1048 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 TMEM168Q9H0V1 697 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 POLMQ9NP87 494 aaPredicted RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 KCMF1Q9P0J7 381 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 URADA6NGE7 173 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 AP3D1O14617 1153 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PRODHO43272 600 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 TNFSF14O43557 240 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 FCMRO60667 390 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SMIM10L1P0DMW3 83 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 ACP2P11117 423 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 RGS8P57771 180 aaPredicted RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 SLC13A2Q13183 592 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 FRRS1Q6ZNA5 592 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PLEKHM3Q6ZWE6 761 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 CCDC190Q86UF4 302 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 POC5Q8NA72 575 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 FAM83FQ8NEG4 500 aaPredicted RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 ZCCHC10Q8TBK6 192 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 COL26A1Q96A83 441 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SMIM10Q96HG1 83 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 BMFQ96LC9 184 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 OR2A5Q96R48 311 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 KCNS3Q9BQ31 491 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PRRG3Q9BZD7 231 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 SIAEQ9HAT2 523 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 CACYBPQ9HB71 228 aaKnown RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
CALD1-222ENST00000495522 CNIH4Q9P003 139 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 PCDHGB6Q9Y5F9 930 aa14.36□□□□□ -0.11
CALD1-222ENST00000495522 HYKKA2RU49 373 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 ZNF670-ZNF695F2Z2N8 137 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 LOC110117498-PIK3R3F6TDL0 507 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 TNFRSF10CO14798 259 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 B3GALT2O43825 422 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 RASGRP1O95267 797 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 UGT2B7P16662 529 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 ALOX12P18054 663 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 MYL12AP19105 171 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 ETV5P41161 510 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 SEPHS1P49903 392 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 ETV1P50549 477 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 SNRPNP63162 240 aaKnown RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 RAB40BQ12829 278 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 DEFB134Q4QY38 66 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 PHC2Q8IXK0 858 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 OR8D4Q8NGM9 314 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 PIK3R3Q92569 461 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 CDS1Q92903 461 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 FAM46AQ96IP4 442 aaKnown RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 CEP19Q96LK0 163 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 MTHFD2LQ9H903 347 aaPredicted RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 ANKMY1Q9P2S6 941 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 SSR3Q9UNL2 185 aa14.35□□□□□ -0.11
CALD1-222ENST00000495522 ZNF443Q9Y2A4 671 aaPredicted RBP14.35□□□□□ -0.11
CALD1-222ENST00000495522 A6NCN8 305 aa14.34□□□□□ -0.11
CALD1-222ENST00000495522 P2RX6O15547 441 aa14.34□□□□□ -0.11
CALD1-222ENST00000495522 CTSVO60911 334 aa14.34□□□□□ -0.11
CALD1-222ENST00000495522 SNX4O95219 450 aa14.34□□□□□ -0.11
CALD1-222ENST00000495522 PTTG1O95997 202 aa14.34□□□□□ -0.11
CALD1-222ENST00000495522 ZNF10P21506 573 aaPredicted RBP14.34□□□□□ -0.11
CALD1-222ENST00000495522 GTF2E2P29084 291 aaKnown RBP14.34□□□□□ -0.11
CALD1-222ENST00000495522 RPS19P39019 145 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms