RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 DUSP5Q16690 384 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 MTDHQ86UE4 582 aaKnown RBP15.75■□□□□ 0.11
HDAC6-235ENST00000495515 CLEC4FQ8N1N0 589 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 FBXO30Q8TB52 745 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 TMCO6Q96DC7 493 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 SLC35A4Q96G79 324 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 COL21A1Q96P44 957 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 BTBD2Q9BX70 525 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 RAD21L1Q9H4I0 556 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 SLC52A3Q9NQ40 469 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 KLHL1Q9NR64 748 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 EXD2Q9NVH0 621 aa15.75■□□□□ 0.11
HDAC6-235ENST00000495515 BBIP1A8MTZ0 92 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ASNA1O43681 348 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 DCTN3O75935 186 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 AK1P00568 194 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 PPIBP23284 216 aaKnown RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 KHKP50053 298 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 FBXW4P57775 412 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 POU6F2P78424 691 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 CYLC2Q14093 348 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 MMEL1Q495T6 779 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 COQ5Q5HYK3 327 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 TBCELQ5QJ74 424 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 EXOSC6Q5RKV6 272 aaKnown RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 LRIF1Q5T3J3 769 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ATAD3BQ5T9A4 648 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 GALNTL5Q7Z4T8 443 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 MDGA2Q7Z553 956 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ZNF227Q86WZ6 799 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 BCORP1Q8N888 145 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 OR10G3Q8NGC4 313 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 OR4N2Q8NGD1 307 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 OR5M3Q8NGP4 307 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 PAQR8Q8TEZ7 354 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ZFP90Q8TF47 636 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 DIO2Q92813 273 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 RMND5BQ96G75 393 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 OR7D2Q96RA2 312 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ADOQ96SZ5 270 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 G6PC3Q9BUM1 346 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 PAIP1Q9H074 479 aaKnown RBP15.74■□□□□ 0.11
HDAC6-235ENST00000495515 TPT1P8Q9HAU6 139 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 ARMCX1Q9P291 453 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 SPTA1P02549 2419 aa15.74■□□□□ 0.11
HDAC6-235ENST00000495515 TLN1Q9Y490 2541 aaKnown RBP15.73■□□□□ 0.11
HDAC6-235ENST00000495515 ASPDHA6ND91 283 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 TSPAN2O60636 221 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 RASAL1O95294 804 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 IL33O95760 270 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 CNR1P21554 472 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 LCN1P31025 176 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 RFX3P48380 749 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 RPS26P62854 115 aaKnown RBP15.73■□□□□ 0.11
HDAC6-235ENST00000495515 PAGE3Q5JUK9 113 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 MTERF4Q7Z6M4 381 aaKnown RBP15.73■□□□□ 0.11
HDAC6-235ENST00000495515 RNF130Q86XS8 419 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 FBXW8Q8N3Y1 598 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 DPP10Q8N608 796 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 ANKS4BQ8N8V4 417 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 RP9Q8TA86 221 aaKnown RBP15.73■□□□□ 0.11
HDAC6-235ENST00000495515 SPPL2AQ8TCT8 520 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 PIK3R3Q92569 461 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 CDS1Q92903 461 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 OR51I1Q9H343 314 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 SH2D2AQ9NP31 389 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 LUZP4Q9P127 313 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 PCDHB14Q9Y5E9 798 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 CHCHD2Q9Y6H1 151 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-235ENST00000495515 CPAMD8Q8IZJ3 1885 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 CNTRLQ7Z7A1 2325 aa15.73■□□□□ 0.11
HDAC6-235ENST00000495515 LOC100653049A0A140TA62 436 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 GXYLT2A0PJZ3 443 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 ANKRD33BA6NCL7 494 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 TTLL8A6PVC2 850 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 PEX1O43933 1283 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 UGT2B11O75310 529 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 KRT34O76011 436 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 SORBS2O94875 1100 aaKnown RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 KCNK2O95069 426 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 PRB1P04280 392 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 ATP6V1C1P21283 382 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 MAN2A2P49641 1150 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 NFYCQ13952 458 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 TNFAIP8L2Q6P589 184 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 C16orf62Q7Z3J2 963 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 DHDDSQ86SQ9 333 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 SNX32Q86XE0 403 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 Q8NA96 180 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 POGLUT1Q8NBL1 392 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 PCYOX1LQ8NBM8 494 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 CCDC197Q8NCU1 140 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 EFHD2Q96C19 240 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 OTUB1Q96FW1 271 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 LRRC37BQ96QE4 947 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 FAM173AQ9BQD7 235 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 HES7Q9BYE0 225 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms