RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ZNF628Q5EBL2 1059 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 TSSK4Q6SA08 328 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 TMEM64Q6YI46 380 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 WDR88Q6ZMY6 472 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 PRSS48Q7RTY5 328 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 PARGQ86W56 976 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 ARL14Q8N4G2 192 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 RERGQ96A58 199 aaPredicted RBP9.7□□□□□ -0.86
SAMM50-206ENST00000494795 PEX11GQ96HA9 241 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 DHRS1Q96LJ7 313 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 ACTRT3Q9BYD9 372 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 UCK2Q9BZX2 261 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 ENKD1Q9H0I2 346 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 OR51E2Q9H255 320 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 FSCN3Q9NQT6 498 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 POT1Q9NUX5 634 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 TMEM9Q9P0T7 183 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 MAU2Q9Y6X3 613 aa9.7□□□□□ -0.86
SAMM50-206ENST00000494795 IGHV5-51A0A0C4DH38 117 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 A0A0J9YY10 115 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ADORA3P0DMS8 318 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CDH3P22223 829 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 GADD45AP24522 165 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SSTR4P31391 388 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 BMP8BP34820 402 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 OPRL1P41146 370 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CXCR4P61073 352 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SYT6Q5T7P8 510 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 FHL5Q5TD97 284 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 KLHL35Q6PF15 583 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 OR2L13Q8N349 312 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ARHGEF39Q8N4T4 335 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 OR52P1PQ8NH57 321 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 LMF1Q96S06 567 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CHCHD3Q9NX63 227 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 PCDHGB1Q9Y5G3 927 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CDC42EP2O14613 210 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 IGLV3-19P01714 112 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CDK1P06493 297 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 MAOAP21397 527 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 NUP107P57740 925 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SMAD4Q13485 552 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 INAVAQ3KP66 663 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ZNF836Q6ZNA1 936 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 RNF44Q7L0R7 432 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ANKRD13BQ86YJ7 626 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 GALNT12Q8IXK2 581 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SIX5Q8N196 739 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 OR56A1Q8NGH5 318 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 RAB2BQ8WUD1 216 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 HSPA12BQ96MM6 686 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SDF2Q99470 211 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 BCL2L10Q9HD36 194 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 FKBP14Q9NWM8 211 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 TMCC3Q9ULS5 477 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CARD8Q9Y2G2 431 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 HSPE1-MOB4S4R3N1 261 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 PNMA8CA0A1B0GUJ8 204 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 TMEM247A6NEH6 219 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ZNF701M0R085 212 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 TLR4O00206 839 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CHST10O43529 356 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 FOXS1O43638 330 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 TLX2O43763 284 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 SLC2A10O95528 541 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 BCL10O95999 233 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 OSMP13725 252 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 PORP16435 677 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 HOXB6P17509 224 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 IDUAP35475 653 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 PRICKLE4Q2TBC4 344 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 NDUFAF6Q330K2 333 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 DESI1Q6ICB0 168 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CDC73Q6P1J9 531 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CAMKVQ8NCB2 501 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 POP5Q969H6 163 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 TGM7Q96PF1 710 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 CCDC3Q9BQI4 270 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 MESP1Q9BRJ9 268 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 GPN2Q9H9Y4 310 aaPredicted RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 C3orf14Q9HBI5 128 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
SAMM50-206ENST00000494795 MAT2BQ9NZL9 334 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 ZNF232Q9UNY5 417 aa9.69□□□□□ -0.86
SAMM50-206ENST00000494795 A0A1W2PR77 199 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 PDE9AO76083 593 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 UBXN7O94888 489 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 IGKV1D-16P01601 117 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 ALPPP05187 535 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 HTR2AP28223 471 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 CD79BP40259 229 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 CCR5P51681 352 aa9.68□□□□□ -0.86
SAMM50-206ENST00000494795 TAS2R41P59536 307 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms