RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 EIPR1Q53HC9 387 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 WIPI1Q5MNZ9 446 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-224ENST00000494132 OR5M10Q6IEU7 315 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 GALNT10Q86SR1 603 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 YRDCQ86U90 279 aaKnown RBP13.43□□□□□ -0.26
ATG4B-224ENST00000494132 OR1J4Q8NGS1 313 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 PIK3R3Q92569 461 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 SDCCAG3Q96C92 435 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 OTUB1Q96FW1 271 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-224ENST00000494132 SLC35A4Q96G79 324 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 TMEM41AQ96HV5 264 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 UBQLN3Q9H347 655 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 SERHLQ9NQF3 203 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 PNPOQ9NVS9 261 aa13.43□□□□□ -0.26
ATG4B-224ENST00000494132 GXYLT2A0PJZ3 443 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 OR6C70A6NIJ9 312 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 BCKDKO14874 412 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SNPHO15079 494 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SCO2O43819 266 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SUSD5O60279 629 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 HCN1O60741 890 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 TBX19O60806 448 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SNRPB2P08579 225 aaKnown RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 HTR1EP28566 365 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 RPL14P50914 215 aaKnown RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 NUP107P57740 925 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 GAB1Q13480 694 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 CASP8Q14790 479 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 TIGD3Q6B0B8 471 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 RTL6Q6ICC9 239 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SLC30A6Q6NXT4 461 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 CCDC71Q8IV32 467 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 WDSUB1Q8N9V3 476 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 NUP43Q8NFH3 380 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 ZFP28Q8NHY6 868 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 NEIL3Q8TAT5 605 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 PHF10Q8WUB8 498 aaKnown RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 SARAFQ96BY9 339 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 TMCO6Q96DC7 493 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 ZBED6CLQ96FA7 236 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 YIPF4Q9BSR8 244 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
ATG4B-224ENST00000494132 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 CBLCQ9ULV8 474 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 FAM215AQ9Y5M1 114 aa13.42□□□□□ -0.26
ATG4B-224ENST00000494132 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 OR14I1A6ND48 311 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 B4DXG7 233 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 SLITRK5O94991 958 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 CLDN14O95500 239 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 HPNP05981 417 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 PRPS2P11908 318 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 GRK2P25098 689 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 ACVR2AP27037 513 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 GABRA3P34903 492 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 FRKP42685 505 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 DIO3P55073 304 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 WNT3P56703 355 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 PMPCAQ10713 525 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 STX5Q13190 355 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 ART3Q13508 389 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 EFR3AQ14156 821 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 DCST1Q5T197 706 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 WLSQ5T9L3 541 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 XKRXQ6PP77 449 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 R3HCC1LQ7Z5L2 792 aaKnown RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 MED12LQ86YW9 2145 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 EID3Q8N140 333 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 FAM83FQ8NEG4 500 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 ARL8AQ96BM9 186 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 TLCD1Q96CP7 247 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 NTNG2Q96CW9 530 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 GIMAP5Q96F15 307 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 RMND5BQ96G75 393 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 LMF2Q9BU23 707 aaKnown RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 Q9N2J8 555 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 ACKR4Q9NPB9 350 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 QPCTLQ9NXS2 382 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 FBXL2Q9UKC9 423 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 RNF6Q9Y252 685 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 EIF3LQ9Y262 564 aaKnown RBP13.41□□□□□ -0.26
ATG4B-224ENST00000494132 WIF1Q9Y5W5 379 aa13.41□□□□□ -0.26
ATG4B-224ENST00000494132 A0A1W2PRB8 838 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 FIGNL2A6NMB9 653 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 KDM4EB2RXH2 506 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-224ENST00000494132 ABCB7O75027 752 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 C6orf47O95873 294 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 IGKV1D-16P01601 117 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 KITP10721 976 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 ACP2P11117 423 aa13.4□□□□□ -0.26
ATG4B-224ENST00000494132 ELAVL4P26378 380 aaKnown RBP13.4□□□□□ -0.26
ATG4B-224ENST00000494132 PNLIPRP2P54317 469 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms