RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RNFT2Q96EX2 444 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 MS4A4EQ96PG1 132 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 KCNS3Q9BQ31 491 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 DPH7Q9BTV6 452 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 MENTQ9BUN1 341 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 GON7Q9BXV9 100 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ACTRT3Q9BYD9 372 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFC4-214ENST00000494047 MRPS30Q9NP92 439 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 SLAMF7Q9NQ25 335 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 DDX28Q9NUL7 540 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 HCFC1R1Q9NWW0 138 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 PTTG3PQ9NZH4 202 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 TBC1D24Q9ULP9 559 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 BAIAP2Q9UQB8 552 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 CAB39Q9Y376 341 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 SPIN1Q9Y657 262 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 MEIOCA2RUB1 952 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ANKRD61A6NGH8 418 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 FAM170BA6NMN3 283 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SGK494L7N484 410 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 CTDSP2O14595 271 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ARHGEF9O43307 516 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ITGA10O75578 1167 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SOX14O95416 240 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 IGHA1P01876 353 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 DNTTP04053 509 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 TP53P04637 393 aaPredicted RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 EPHX1P07099 455 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 C5AR1P21730 350 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 HTR1FP30939 366 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 TALDO1P37837 337 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SOX3P41225 446 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 P2RY2P41231 377 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 INPP1P49441 399 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 CDH11P55287 796 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 RPS15AP62244 130 aaKnown RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 NTHL1P78549 312 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 POU4F2Q12837 409 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 HNRNPA0Q13151 305 aaKnown RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 KRT33BQ14525 404 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ZNF234Q14588 700 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 GPAT3Q53EU6 434 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 BAIAP2L2Q6UXY1 529 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 C16orf62Q7Z3J2 963 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SZRD1Q7Z422 152 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ADCK2Q7Z695 626 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 NRARPQ7Z6K4 114 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ZER1Q7Z7L7 766 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 TPRA1Q86W33 373 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 NRROSQ86YC3 692 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SNX29P2Q8IUI4 249 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 TCTE3Q8IZS6 198 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ASCC1Q8N9N2 400 aaKnown RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 ZNF740Q8NDX6 193 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 ANKK1Q8NFD2 765 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 OR2T33Q8NG76 320 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SORCS1Q8WY21 1168 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 FGF11Q92914 225 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SDHCQ99643 169 aaPredicted RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 NDEL1Q9GZM8 345 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 KIR3DX1Q9H7L2 352 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 NIPAL2Q9H841 368 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 RNF121Q9H920 327 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 TRPV4Q9HBA0 871 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 FOLH1BQ9HBA9 442 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SLC2A4RGQ9NR83 387 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 RBFOX1Q9NWB1 397 aaKnown RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 IL20Q9NYY1 176 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 PTGFRNQ9P2B2 879 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 THAP10Q9P2Z0 257 aaPredicted RBP10.78□□□□□ -0.68
RFC4-214ENST00000494047 RHCGQ9UBD6 479 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 FBXW2Q9UKT8 454 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 CBLCQ9ULV8 474 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SATB2Q9UPW6 733 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 CLCA2Q9UQC9 943 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
RFC4-214ENST00000494047 A0A1W2PPV9 198 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 A0A1W2PQL4 384 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 H7BY64 318 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 CASKO14936 926 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 ORC5O43913 435 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 TMPRSS11DO60235 418 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 TBX6O95947 436 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 GUSBP08236 651 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 HOXC4P09017 264 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 TLX1P31314 330 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 TRIM23P36406 574 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 SLC1A3P43003 542 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 MTNR1BP49286 362 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 RGS8P57771 180 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 ACTC1P68032 377 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 ACTA1P68133 377 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 SHC2P98077 582 aa10.77□□□□□ -0.68
RFC4-214ENST00000494047 PIN1Q13526 163 aaPredicted RBP10.77□□□□□ -0.68
RFC4-214ENST00000494047 SF3A2Q15428 464 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms