RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, human

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LCOR-208	ENST00000493486	CXorf21	Q9HAI6	301 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	MAT2B	Q9NZL9	334 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	EHD3	Q9NZN3	535 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	FLRT3	Q9NZU0	649 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	GIMAP2	Q9UG22	337 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	TBK1	Q9UHD2	729 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	ZNF639	Q9UID6	485 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	G3BP2	Q9UN86	482 aa	Known RBP	3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	ERVK-11	Q9UQG0	969 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	ERVK-19	Q9WJR5	959 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	NSD1	Q96L73	2696 aa	Predicted RBP	3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	MED12L	Q86YW9	2145 aa		3.17	□□□□□ -1.9
LCOR-208	ENST00000493486	ABCA4	P78363	2273 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486		A0A087WUV0	522 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486		A0A0G2JNJ9	132 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486		A0A1B0GVC2	190 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	EXOC1L	A0A1B0GW35	172 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ATP6AP2	A0A1C7CYW4	349 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	URAD	A6NGE7	173 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SYCE1L	A8MT33	242 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PRSS44	E7EML9	344 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	KLHL41	O60662	606 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PLIN3	O60664	434 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	UGDH	O60701	494 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TRIM3	O75382	744 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ATP6AP2	O75787	350 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IGKV1D-16	P01601	117 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IGHG3	P01860	377 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	CRYAB	P02511	175 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	S100B	P04271	92 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TUBB4A	P04350	444 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IFNA16	P05015	189 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	CHRNG	P07510	517 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	INHBA	P08476	426 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IL3	P08700	152 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SNRPA	P09012	282 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SLC35E2	P0CK97	266 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NR2F6	P10588	404 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	COL6A2	P12110	1019 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	CPM	P14384	443 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ALOX15	P16050	662 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TNNI3	P19429	210 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IMPDH1	P20839	514 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PTX3	P26022	381 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	HTR1E	P28566	365 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	FEN1	P39748	380 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	EMD	P50402	254 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SSR4	P51571	173 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	XK	P51811	444 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NAGLU	P54802	743 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	GAS1	P54826	345 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	DLX5	P56178	289 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NUP107	P57740	925 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PPIA	P62937	165 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	STX4	Q12846	297 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	LSAMP	Q13449	338 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ZNF267	Q14586	743 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PCLAF	Q15004	111 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	CEBPE	Q15744	281 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ZNF630	Q2M218	657 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	HYAL4	Q2M3T9	481 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	AP5B1	Q2VPB7	878 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	UGT3A2	Q3SY77	523 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	GLE1	Q53GS7	698 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ZNF628	Q5EBL2	1059 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	CLEC6A	Q6EIG7	209 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	VASN	Q6EMK4	673 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ANKRD26P1	Q6NSI1	321 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NIPAL1	Q6NVV3	410 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SLC48A1	Q6P1K1	146 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486		Q6ZSR9	355 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	WDR53	Q7Z5U6	358 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NUDT13	Q86X67	352 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	LDLRAD3	Q86YD5	345 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	SRRM1	Q8IYB3	904 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ST13P4	Q8IZP2	240 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	C4orf33	Q8N1A6	199 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	LRRC25	Q8N386	305 aa	Predicted RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TMEM132C	Q8N3T6	1108 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TBC1D19	Q8N5T2	526 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TMEM156	Q8N614	296 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	WDSUB1	Q8N9V3	476 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TMEM178A	Q8NBL3	297 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR7G2	Q8NG99	324 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR4N2	Q8NGD1	307 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR5M9	Q8NGP3	310 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR5M3	Q8NGP4	307 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR9A2	Q8NGT5	310 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR6Y1	Q8NGX8	325 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	OR8K3	Q8NH51	312 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	IL17D	Q8TAD2	202 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NUBPL	Q8TB37	319 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	FAM57A	Q8TBR7	257 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	PAQR8	Q8TEZ7	354 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	AEN	Q8WTP8	325 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	RNF138	Q8WVD3	245 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	NRGN	Q92686	78 aa		3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	ANP32B	Q92688	251 aa	Known RBP	3.16	□□□□□ -1.9
LCOR-208	ENST00000493486	TANK	Q92844	425 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms