RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CRHP06850 196 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 UROSP10746 265 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 CHN1P15882 459 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 NTSP30990 170 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 NCBP2P52298 156 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 DSCR4P56555 118 aaPredicted RBP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 DECR1Q16698 335 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 ADGRE4PQ86SQ3 457 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 SLC44A2Q8IWA5 706 aaPredicted RBP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 SIMC1Q8NDZ2 872 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 SFXN2Q96NB2 322 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 DACH2Q96NX9 599 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 TUBA1CQ9BQE3 449 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 CXXC4Q9H2H0 198 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 PTGES2Q9H7Z7 377 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 MYNNQ9NPC7 610 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 STOML1Q9UBI4 398 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 TBK1Q9UHD2 729 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 ST6GALNAC2Q9UJ37 374 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 MID2Q9UJV3 735 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 DKKL1Q9UK85 242 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 C19orf53Q9UNZ5 99 aaPredicted RBP11.32□□□□□ -0.6
COL6A1-205ENST00000492851 EEF1E1-BLOC1S5C9J1V9 151 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 G3V2L1 256 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 SLC28A1O00337 649 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 EEF1E1O43324 174 aaKnown RBP11.31□□□□□ -0.6
COL6A1-205ENST00000492851 PEPDP12955 493 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 DDX5P17844 614 aaKnown RBP11.31□□□□□ -0.6
COL6A1-205ENST00000492851 GRK2P25098 689 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 TACR1P25103 407 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 DPP4P27487 766 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 CRHR1P34998 444 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 PCYT1AP49585 367 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 HTR6P50406 440 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 CORO7P57737 925 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 SRYQ05066 204 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 GANABQ14697 944 aaKnown RBP11.31□□□□□ -0.6
COL6A1-205ENST00000492851 DCST1Q5T197 706 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 CDC20BQ86Y33 519 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 OR7G2Q8NG99 324 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 OR4K17Q8NGC6 315 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL6A1-205ENST00000492851 MZB1Q8WU39 189 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 EBPLQ9BY08 206 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 Q9N2J8 555 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 PPP4R1LQ9P1A2 415 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 CBLCQ9ULV8 474 aa11.31□□□□□ -0.6
COL6A1-205ENST00000492851 POLQO75417 2590 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 DNAJC13O75165 2243 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CLCA1A8K7I4 914 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 UBFD1O14562 309 aaKnown RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CASKO14936 926 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 RGS14O43566 566 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ZIC3O60481 467 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 JUNP05412 331 aaKnown RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CD99P14209 185 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CPA3P15088 417 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ZNF708P17019 499 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 PRPH2P23942 346 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 EVI2BP34910 448 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CPA2P48052 419 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 LHX2P50458 406 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 WNT3P56703 355 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 PPP2R2AP63151 447 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 PSG6Q00889 435 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 OCRLQ01968 901 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ZNF155Q12901 538 aaPredicted RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 FGFBP1Q14512 234 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 GLYR1Q49A26 553 aaPredicted RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 FRMD7Q6ZUT3 714 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 TDRPQ86YL5 185 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 GRAMD2AQ8IUY3 354 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 OR2L13Q8N349 312 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 MEIOBQ8N635 442 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CCDC63Q8NA47 563 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 CDC26Q8NHZ8 85 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ELP4Q96EB1 424 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 KCNA7Q96RP8 456 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 YIPF4Q9BSR8 244 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 TRMOQ9BU70 441 aa11.3□□□□□ -0.6
COL6A1-205ENST00000492851 RBM24Q9BX46 236 aaKnown RBP11.3□□□□□ -0.6
COL6A1-205ENST00000492851 ANKRA2Q9H9E1 313 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms