RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 HBA1P69905 142 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 Q0VFX4 171 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 TRAP1Q12931 704 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 GAB1Q13480 694 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 RIPK1Q13546 671 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 FAM53BQ14153 422 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 TRIM25Q14258 630 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 NDUFA9Q16795 377 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 C6orf163Q5TEZ5 329 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 AGAP7PQ5VUJ5 663 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 IRAK1BP1Q5VVH5 260 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 FAM180BQ6P0A1 224 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 SLC48A1Q6P1K1 146 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 IGFL2Q6UWQ7 119 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF621Q6ZSS3 439 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF551Q7Z340 670 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 CALHM3Q86XJ0 350 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 C10orf111Q8N326 155 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 AMER2Q8N7J2 671 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 OR5T3Q8NGG3 340 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 OR9A4Q8NGU2 314 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 OR5P2Q8WZ92 322 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 C8orf44Q96CB5 159 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 THOC3Q96J01 351 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 AGAP4Q96P64 663 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 SH3GL1Q99961 368 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 CRB3Q9BUF7 120 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 THUMPD3Q9BV44 507 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 NPLQ9BXD5 320 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 PCDHAC1Q9H158 963 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 GLIPR2Q9H4G4 154 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 KAT8Q9H7Z6 458 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 SIRT3Q9NTG7 399 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 ACSS1Q9NUB1 689 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF282Q9UDV7 671 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 PLEKHB1Q9UF11 243 aaPredicted RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 NXT1Q9UKK6 140 aaKnown RBP7.04□□□□□ -1.28
CLDN1-202ENST00000490800 UTS2RQ9UKP6 389 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 USP22Q9UPT9 525 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 NTNG1Q9Y2I2 539 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 AP3M1Q9Y2T2 418 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 GMEB1Q9Y692 573 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 SCN2AQ99250 2005 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 FER1L5A0AVI2 2057 aa7.04□□□□□ -1.28
CLDN1-202ENST00000490800 A0A1W2PS29 197 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 A1L4Q6 167 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ANKUB1A6NFN9 424 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FAM227AF5H4B4 570 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CLIC1O00299 241 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CYR61O00622 381 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CHST10O43529 356 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 KRT36O76013 467 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 NSA2O95478 260 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FBLP22087 321 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 HTR1EP28566 365 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 BUD31P41223 144 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ERFP50548 548 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CDK9P50750 372 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 EMP2P54851 167 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 MANFP55145 182 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 RAB38P57729 211 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 DUSP2Q05923 314 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 BNIP2Q12982 314 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FLOT2Q14254 428 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 MLC1Q15049 377 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CEBPEQ15744 281 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FXNQ16595 210 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 SYT16Q17RD7 645 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF750Q32MQ0 723 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 GLIPR1L2Q4G1C9 344 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 OR52E8Q6IFG1 317 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 LINC00696Q6ZRV3 163 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 NLRC3Q7RTR2 1065 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 IFNEQ86WN2 208 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 C10orf67Q8IYJ2 551 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CLEC4FQ8N1N0 589 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 TMEM52Q8NDY8 209 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CATSPER1Q8NEC5 780 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 OR10A6Q8NH74 314 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 PSMA8Q8TAA3 256 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZFP90Q8TF47 636 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ASB9Q96DX5 294 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 MMABQ96EY8 250 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CNRIP1Q96F85 164 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZBED6CLQ96FA7 236 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 FAM46AQ96IP4 442 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 VPS50Q96JG6 964 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF681Q96N22 645 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF583Q96ND8 569 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 AMDHD1Q96NU7 426 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 BBS4Q96RK4 519 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 BARD1Q99728 777 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 KCTD14Q9BQ13 255 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ECSITQ9BQ95 431 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 WDR77Q9BQA1 342 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 LHPPQ9H008 270 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms