RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 HOXC12P31275 282 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 MPIP34949 423 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 PNLIPRP2P54317 469 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 CLDN18P56856 261 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 ACSM2AQ08AH3 577 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 CT45A2Q5DJT8 189 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 LGSNQ5TDP6 509 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 ACSM2BQ68CK6 577 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 SLC44A2Q8IWA5 706 aaPredicted RBP16.11■□□□□ 0.17
YIPF3-208ENST00000490447 FAM9CQ8IZT9 166 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 CNEP1R1Q8N9A8 125 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 METTL6Q8TCB7 284 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 DCAKDQ8WVC6 231 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 IFT81Q8WYA0 676 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 EFHD2Q96C19 240 aaPredicted RBP16.11■□□□□ 0.17
YIPF3-208ENST00000490447 VSTM2LQ96N03 204 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 STMN4Q9H169 189 aaPredicted RBP16.11■□□□□ 0.17
YIPF3-208ENST00000490447 FOLH1BQ9HBA9 442 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 PPP4R1LQ9P1A2 415 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 STK38LQ9Y2H1 464 aa16.11■□□□□ 0.17
YIPF3-208ENST00000490447 DOCK7Q96N67 2140 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 A0A087WUV0 522 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 A0A1W2PNV4 684 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 CCDC151A5D8V7 595 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 MSTNO14793 375 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 SNRPAP09012 282 aaKnown RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 DSCR4P56555 118 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 NKX6-1P78426 367 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 ZNF155Q12901 538 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 RAET1LQ5VY80 246 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 SHEQ5VZ18 495 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 FAM219BQ5XKK7 198 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 NPSR1Q6W5P4 371 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 GPRIN3Q6ZVF9 776 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 MEIOBQ8N635 442 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
YIPF3-208ENST00000490447 FAM111AQ96PZ2 611 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 BBS4Q96RK4 519 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 ZNF382Q96SR6 550 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 ACPTQ9BZG2 426 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 SLC35C2Q9NQQ7 365 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 ZNF226Q9NYT6 803 aa16.1■□□□□ 0.17
YIPF3-208ENST00000490447 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 EXOC1LA0A1B0GW35 172 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 SLC22A20A6NK97 555 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-208ENST00000490447 ARHGEF9O43307 516 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 HCRTR2O43614 444 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-208ENST00000490447 COQ9O75208 318 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 NME6O75414 186 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-208ENST00000490447 TNFSF13O75888 250 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 TGM6O95932 706 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 CRHP06850 196 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 SBK3P0C264 359 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 PEPDP12955 493 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 TIA1P31483 386 aaKnown RBP eCLIP16.09■□□□□ 0.17
YIPF3-208ENST00000490447 EVI2BP34910 448 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 EEFSECP57772 596 aaKnown RBP16.09■□□□□ 0.17
YIPF3-208ENST00000490447 LTBQ06643 244 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 BCL2A1Q16548 175 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 P3H2Q8IVL5 708 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 C16orf78Q8WTQ4 265 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
YIPF3-208ENST00000490447 MPDZO75970 2070 aa16.08■□□□□ 0.17
YIPF3-208ENST00000490447 SCO2O43819 266 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 PLOD3O60568 738 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-208ENST00000490447 INHBBP09529 407 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 CHN1P15882 459 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 GSTM5P46439 218 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 KCNJ5P48544 419 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
YIPF3-208ENST00000490447 UNC50Q53HI1 259 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 SLC22A9Q8IVM8 553 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 TMEM151AQ8N4L1 468 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 OR7G2Q8NG99 324 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 APIPQ96GX9 242 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 TMEM237Q96Q45 408 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 MED18Q9BUE0 208 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 EBPLQ9BY08 206 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 PTGES2Q9H7Z7 377 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 ZNF395Q9H8N7 513 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-208ENST00000490447 SDHAF3Q9NRP4 125 aa16.08■□□□□ 0.16
YIPF3-208ENST00000490447 C6orf203Q9P0P8 240 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-208ENST00000490447 A0A1W2PPR1 153 aa16.07■□□□□ 0.16
YIPF3-208ENST00000490447 ZIC3O60481 467 aa16.07■□□□□ 0.16
YIPF3-208ENST00000490447 SMPD2O60906 423 aa16.07■□□□□ 0.16
YIPF3-208ENST00000490447 ANXA4P09525 319 aaPredicted RBP16.07■□□□□ 0.16
YIPF3-208ENST00000490447 HK1P19367 917 aa16.07■□□□□ 0.16
YIPF3-208ENST00000490447 ATP5F1P24539 256 aaPredicted RBP16.07■□□□□ 0.16
YIPF3-208ENST00000490447 CLK3P49761 638 aaKnown RBP16.07■□□□□ 0.16
YIPF3-208ENST00000490447 NCBP2P52298 156 aaKnown RBP eCLIP16.07■□□□□ 0.16
YIPF3-208ENST00000490447 BTKQ06187 659 aa16.07■□□□□ 0.16
YIPF3-208ENST00000490447 FAM27E3Q08E93 113 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms