RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ZBTB44Q8NCP5 570 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 OR13F1Q8NGS4 319 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 RDH11Q8TC12 318 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 FTHL17Q9BXU8 183 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 TRIM9Q9C026 710 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 DPH5Q9H2P9 285 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 MIEF1Q9NQG6 463 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 TMEM9Q9P0T7 183 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 FAM153AQ9UHL3 310 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 NARFQ9UHQ1 456 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 BLOC1S6Q9UL45 172 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 PLA2G4CQ9UP65 541 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 KLHDC2Q9Y2U9 406 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 KIF3AQ9Y496 699 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 ATP8B3O60423 1300 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 K7EPI3 171 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 CYB561D2O14569 222 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 SLC2A10O95528 541 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 APRTP07741 180 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 ALPIP09923 528 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 RALAP11233 206 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 CD1EP15812 388 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 FCARP24071 287 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 IGFBP5P24593 272 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 DNAJB1P25685 340 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 PTPN4P29074 926 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 PRKAR2BP31323 418 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 OR1D4P47884 311 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 PITPNBP48739 271 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 PRKCEQ02156 737 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 SCGB2A2Q13296 93 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 ASAH1Q13510 395 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 HKDC1Q2TB90 917 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 DDI2Q5TDH0 399 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 NKAIN2Q5VXU1 208 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 UNC5DQ6UXZ4 953 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 SYVN1Q86TM6 617 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 SLC22A16Q86VW1 577 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 P3H4Q92791 437 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 SYAP1Q96A49 352 aaPredicted RBP2.47□□□□□ -2.01
RFC4-213ENST00000489028 RPGRIP1Q96KN7 1286 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 ZNF285Q96NJ3 590 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 TSGA13Q96PP4 275 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 OR5M11Q96RB7 305 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 CPXM1Q96SM3 734 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 COQ7Q99807 217 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 NACA2Q9H009 215 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 TMEM231Q9H6L2 316 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 LIN28AQ9H9Z2 209 aaKnown RBP2.47□□□□□ -2.01
RFC4-213ENST00000489028 NGBQ9NPG2 151 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 ESM1Q9NQ30 184 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 CENPMQ9NSP4 180 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 KLRF1Q9NZS2 232 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 NDUFA13Q9P0J0 144 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 COPS7AQ9UBW8 275 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 NUDCQ9Y266 331 aa2.47□□□□□ -2.01
RFC4-213ENST00000489028 WI2-2373I1.2A0A1W2PRP0 233 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 PANO1I0J062 215 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ARPC1BO15143 372 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 CLDN3O15551 220 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 NUDT21O43809 227 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 RANBP6O60518 1105 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 PDE5AO76074 875 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 AKR7A3O95154 331 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 CT45A10P0DMU9 189 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 RPA1P27694 616 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 POU3F4P49335 361 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 STX17P56962 302 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 SLC26A5P58743 744 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 CDKL1Q00532 357 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 CKAP4Q07065 602 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 KLHL30Q0D2K2 578 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 KARSQ15046 597 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 SLC22A10Q63ZE4 541 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 HIST2H2AA3Q6FI13 130 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 AFTPHQ6ULP2 937 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ARSKQ6UWY0 536 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ISLR2Q6UXK2 745 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ASRGL1Q7L266 308 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 APOBEC3FQ8IUX4 373 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 CNPY4Q8N129 248 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 RNF148Q8N7C7 305 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 COLGALT1Q8NBJ5 622 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 FAM71CQ8NEG0 241 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 OR56B1Q8NGI3 324 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 DQX1Q8TE96 717 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 FRAT1Q92837 279 aaPredicted RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 RAB39BQ96DA2 213 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 MRPL38Q96DV4 380 aaKnown RBP2.46□□□□□ -2.02
RFC4-213ENST00000489028 C9orf85Q96MD7 179 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 GPR137Q96N19 417 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ACCSQ96QU6 501 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 NMNAT2Q9BZQ4 307 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 SOHLH2Q9NX45 425 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 VPS54Q9P1Q0 977 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 ANKMY1Q9P2S6 941 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 KLHL21Q9UJP4 597 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 CA5BQ9Y2D0 317 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 U3KQV3 271 aa2.46□□□□□ -2.02
RFC4-213ENST00000489028 G3V3Y1 287 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms