RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	KLHL28	Q9NXS3	571 aa		13.72	□□□□□ -0.21
NELFA-215	ENST00000488452	NINJ2	Q9NZG7	142 aa		13.72	□□□□□ -0.21
NELFA-215	ENST00000488452	MCM8	Q9UJA3	840 aa		13.72	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF225	Q9UK10	706 aa		13.72	□□□□□ -0.21
NELFA-215	ENST00000488452	SLC22A20	A6NK97	555 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	DEFB108A	A8MXU0	73 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	MANBA	O00462	879 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	SIAH2	O43255	324 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	NME6	O75414	186 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	OR4F21	O95013	312 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	HSD3B1	P14060	373 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	FPR1	P21462	350 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	TCEA1	P23193	301 aa	Known RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	HSD3B2	P26439	372 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	HSD17B3	P37058	310 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	SERPINB9	P50453	376 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	EEFSEC	P57772	596 aa	Known RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	UBAP2	Q5T6F2	1119 aa	Known RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	VWA1	Q6PCB0	445 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	PRSS57	Q6UWY2	283 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	NPSR1	Q6W5P4	371 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	TAOK1	Q7L7X3	1001 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	BTLA	Q7Z6A9	289 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	MEIOB	Q8N635	442 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	OR4K17	Q8NGC6	315 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	OR9A2	Q8NGT5	310 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	EXOSC8	Q96B26	276 aa	Known RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	PIK3IP1	Q96FE7	263 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	PGM2	Q96G03	612 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	COX4I2	Q96KJ9	171 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	HBEGF	Q99075	208 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	SLC39A3	Q9BRY0	314 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	FUT8	Q9BYC5	575 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	MRPL46	Q9H2W6	279 aa	Known RBP	13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	FOLH1B	Q9HBA9	442 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452	ELOVL5	Q9NYP7	299 aa		13.71	□□□□□ -0.21
NELFA-215	ENST00000488452		A8MT66	165 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452		B4DXG7	233 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	KRT6A	P02538	564 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	KRT6B	P04259	564 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	IL3	P08700	152 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	SBK3	P0C264	359 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	CRYGS	P22914	178 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	KIR2DL2	P43627	348 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	KRT6C	P48668	564 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	CLC	Q05315	142 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	CSTF3	Q12996	717 aa	Known RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	RELL1	Q8IUW5	271 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	UBQLNL	Q8IYU4	475 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	CIART	Q8N365	385 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	TMEM151A	Q8N4L1	468 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	OR4N2	Q8NGD1	307 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	NUDT8	Q8WV74	236 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	FIG4	Q92562	907 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	EFHD2	Q96C19	240 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	MTBP	Q96DY7	904 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	MED18	Q9BUE0	208 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	BDH2	Q9BUT1	245 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	DSN1	Q9H410	356 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	SDHAF3	Q9NRP4	125 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	GIMAP4	Q9NUV9	329 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	TAS2R9	Q9NYW1	312 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	PPP4R1L	Q9P1A2	415 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	OR10H1	Q9Y4A9	318 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	DNHD1	Q96M86	4753 aa		13.7	□□□□□ -0.22
NELFA-215	ENST00000488452	GNG14	A0A1W2PPG7	69 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	C17orf51	A8MQB3	221 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452		H7C1Q1	480 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	LINC01387	J3KSC0	135 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	EMC8	O43402	210 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	PCDH7	O60245	1069 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	PLOD3	O60568	738 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	ULK1	O75385	1050 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	TNFRSF21	O75509	655 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CTAGE8	P0CG41	777 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	POU2F1	P14859	743 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CHN1	P15882	459 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	HK1	P19367	917 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	MPI	P34949	423 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	UGT2B10	P36537	528 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CLDN15	P56746	228 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	RAE1	P78406	368 aa	Known RBP	13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	HEPACAM	Q14CZ8	416 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	RASA2	Q15283	850 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	FAM219B	Q5XKK7	198 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CTAGE4	Q8IX94	777 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CDYL2	Q8N8U2	506 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	FADS6	Q8N9I5	356 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	OR2M3	Q8NG83	312 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	C16orf78	Q8WTQ4	265 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	ZNF845	Q96IR2	970 aa	Predicted RBP	13.69	□□□□□ -0.22
NELFA-215	ENST00000488452		Q96MF0	132 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	PAFAH2	Q99487	392 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	CCL19	Q99731	98 aa		13.69	□□□□□ -0.22
NELFA-215	ENST00000488452	UBTD1	Q9HAC8	227 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms