RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CUX2O14529 1486 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 AGRNO00468 2067 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF318Q5VUA4 2279 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 WASH3PC4AMC7 463 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 H0YL77 283 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 K7EPI3 171 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 LRRTM2O43300 516 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 LANCL1O43813 399 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 DIRAS3O95661 229 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 AK1P00568 194 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 HPP00738 406 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 IFNB1P01574 187 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 WNT2P09544 360 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 FOLR2P14207 255 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 PAICSP22234 425 aaKnown RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 AXLP30530 894 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 MDH1P40925 334 aaKnown RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 RPL34P49207 117 aaKnown RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 STK19P49842 368 aaPredicted RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 COX10Q12887 443 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 EXOSC2Q13868 293 aaKnown RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 CRMP1Q14194 572 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 ZIC1Q15915 447 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 PNCKQ6P2M8 343 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 LRRC8BQ6P9F7 803 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 AFTPHQ6ULP2 937 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 WASH2PQ6VEQ5 465 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 HACD2Q6Y1H2 254 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 LPCAT2Q7L5N7 544 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 TEX9Q8N6V9 391 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 OR6T1Q8NGN1 323 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 RPP25Q9BUL9 199 aaKnown RBP2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 LPAR2Q9HBW0 351 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF581Q9P0T4 197 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 SENP1Q9P0U3 644 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 RNF115Q9Y4L5 304 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 CSAG2Q9Y5P2 127 aa2.76□□□□□ -1.97
SNRNP27-204ENST00000487029 CCDC180Q9P1Z9 1646 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 TRBV7-9A0A0J9YWB2 115 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 TRIM49BA6NDI0 452 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 SRRM5B3KS81 715 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 E9PAM4 449 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PHF1O43189 567 aaPredicted RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 SMPD2O60906 423 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 KBTBD11O94819 623 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 VENTXO95231 258 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 KRT6BP04259 564 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 HEXBP07686 556 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 FAM200BP0CF97 657 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 GSTT2P0CG29 244 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 GSTT2BP0CG30 244 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 THRBP10828 461 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 NCF1P14598 390 aaPredicted RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 UQCRBP14927 111 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PVRP15151 417 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 TNNI3P19429 210 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 IGFBP5P24593 272 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CYP2F1P24903 491 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 HPDP32754 393 aaPredicted RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ADRA1AP35348 466 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ACAA2P42765 397 aaKnown RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PTGFRP43088 359 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 KRT6CP48668 564 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 TRPC1P48995 793 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 METAP1P53582 386 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 NAPAP54920 295 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CDKN3Q16667 212 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CYBRD1Q53TN4 286 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 Q7L0L9 218 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PRSS48Q7RTY5 328 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CEACAM19Q7Z692 300 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ERICH1Q86X53 443 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 HIPK1Q86Z02 1210 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 EFCAB13Q8IY85 973 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 GCNT2Q8N0V5 402 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 RFESDQ8TAC1 157 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 FNDC8Q8TC99 324 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 RSPH1Q8WYR4 309 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ART4Q93070 314 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ADIPOR1Q96A54 375 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 DNAJA3Q96EY1 480 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 C11orf24Q96F05 449 aaPredicted RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ZBED6CLQ96FA7 236 aaPredicted RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PIWIL1Q96J94 861 aaKnown RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 VSTM2LQ96N03 204 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 VPS35Q96QK1 796 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 GPA33Q99795 319 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 COQ10BQ9H8M1 238 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 POLD4Q9HCU8 107 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 C1orf123Q9NWV4 160 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CLEC5AQ9NY25 188 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 ARMCX1Q9P291 453 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 CHMP2BQ9UQN3 213 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 EXOSC1Q9Y3B2 195 aaKnown RBP2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 KIF3AQ9Y496 699 aa2.75□□□□□ -1.97
SNRNP27-204ENST00000487029 PARD3Q8TEW0 1356 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 CCDC7Q96M83 1385 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms