RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PDX1P52945 283 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 ACTR1AP61163 376 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SNRPNP63162 240 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SUZ12Q15022 739 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 MFSD12Q6NUT3 480 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CDC73Q6P1J9 531 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC27A4Q6P1M0 643 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 PAQR6Q6TCH4 344 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TRIM73Q86UV7 250 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SAMD14Q8IZD0 417 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 FAM83FQ8NEG4 500 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 OR7G2Q8NG99 324 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 OR52P1PQ8NH57 321 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TSACCQ96A04 125 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SMIM10Q96HG1 83 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 OR2A5Q96R48 311 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SERINC2Q96SA4 455 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 TWSG1Q9GZX9 223 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 SAP130Q9H0E3 1048 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 MRPS18AQ9NVS2 196 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 KLHL28Q9NXS3 571 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 KCMF1Q9P0J7 381 aa16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 CRNNQ9UBG3 495 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-207ENST00000486828 UBXN7O94888 489 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 APBB3O95704 486 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 AGR2O95994 175 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 TRHRP34981 398 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC13A2Q13183 592 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 KLHL22Q53GT1 634 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 PRRT3Q5FWE3 981 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 C3orf38Q5JPI3 329 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF730Q6ZMV8 503 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 RASSF6Q6ZTQ3 369 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 CCDC190Q86UF4 302 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 MEX3DQ86XN8 651 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 OR9Q1Q8NGQ5 310 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 BMFQ96LC9 184 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 OR2A14Q96R47 310 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 SIAEQ9HAT2 523 aa16.83■□□□□ 0.28
PDLIM7-207ENST00000486828 TRBV23OR9-2A0A075B6M9 112 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 IRGMA1A4Y4 181 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 HYKKA2RU49 373 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 A6NCN8 305 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 TNFSF14O43557 240 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 FCMRO60667 390 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ACP2P11117 423 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 MAGP20916 626 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 CTHP32929 405 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 OMPP47874 163 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 AVPR1BP47901 424 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 GAS1P54826 345 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SPANXN2Q5MJ10 180 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 FRRS1Q6ZNA5 592 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 PHC2Q8IXK0 858 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ZBTB8BQ8NAP8 495 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC16A11Q8NCK7 471 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 OR4K14Q8NGD5 310 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 OR8D4Q8NGM9 314 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 PIGXQ8TBF5 258 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 KCNS3Q9BQ31 491 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 TMEM168Q9H0V1 697 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 KLHL3Q9UH77 587 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 PCDHGB6Q9Y5F9 930 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SNTNA6NMZ2 147 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF670-ZNF695F2Z2N8 137 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 AP3D1O14617 1153 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 P2RX6O15547 441 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 PRODHO43272 600 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SNX4O95219 450 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 GTF2E2P29084 291 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 RPS19P39019 145 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ETV5P41161 510 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SEPHS1P49903 392 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ETV1P50549 477 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 RGS8P57771 180 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ADAM15Q13444 863 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 RRM2BQ7LG56 351 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 OR2L13Q8N349 312 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 POC5Q8NA72 575 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ZCCHC10Q8TBK6 192 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 CDS1Q92903 461 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 COL26A1Q96A83 441 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 TRMT61AQ96FX7 289 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 FAM46AQ96IP4 442 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC38A2Q96QD8 506 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 S1PR5Q9H228 398 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 FGF20Q9NP95 211 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 CD93Q9NPY3 652 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 CNIH4Q9P003 139 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF443Q9Y2A4 671 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 COL6A3P12111 3177 aa16.82■□□□□ 0.28
PDLIM7-207ENST00000486828 URADA6NGE7 173 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 LOC110117498-PIK3R3F6TDL0 507 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 WWP2O00308 870 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 CTSVO60911 334 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 RASGRP1O95267 797 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 UGT2B7P16662 529 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 ALOX12P18054 663 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms