RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SHISA6Q6ZSJ9 500 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 NDUFAF7Q7L592 441 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 PID1Q7Z2X4 250 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 SNX20Q7Z614 316 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 NUDT13Q86X67 352 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 EID3Q8N140 333 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 TTLQ8NG68 377 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 OR4K2Q8NGD2 314 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 ANGPTL6Q8NI99 470 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 NAT14Q8WUY8 206 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 MITD1Q8WV92 249 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 TFB1MQ8WVM0 346 aaKnown RBP6.34□□□□□ -1.39
HDAC3-209ENST00000486618 RAD51AP1Q96B01 352 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 TMEM186Q96B77 213 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 RASD2Q96D21 266 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 SPDL1Q96EA4 605 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 HES6Q96HZ4 224 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 OLFM3Q96PB7 478 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 FCRL5Q96RD9 977 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 VAT1Q99536 393 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 NRTNQ99748 197 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 FSD1LQ9BXM9 530 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 ENKD1Q9H0I2 346 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 VCX2Q9H322 139 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 KLHL8Q9P2G9 620 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-209ENST00000486618 UVRAGQ9P2Y5 699 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 TRPC4Q9UBN4 977 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 ASF1AQ9Y294 204 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 NEU2Q9Y3R4 380 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.34□□□□□ -1.39
HDAC3-209ENST00000486618 AKAP6Q13023 2319 aa6.34□□□□□ -1.39
HDAC3-209ENST00000486618 SCN2AQ99250 2005 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 A0A0U1RQV5 110 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 A0A1B0GTL3 188 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TMEM82A0PJX8 343 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 OR5H15A6NDH6 313 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 NOTOA8MTQ0 251 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ETV2O00321 342 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 QSOX1O00391 747 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 FCHO1O14526 889 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TSPAN4O14817 238 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 LIN7AO14910 233 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SMAD9O15198 467 aaKnown RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ASNA1O43681 348 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 PRAMEF2O60811 474 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 DNAJB6O75190 326 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ANXA9O76027 345 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 AP2A1O95782 977 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 EIF2S1P05198 315 aaKnown RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SPARCP09486 303 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 H2AFZP0C0S5 128 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TMEM253P0C7T8 217 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 MED14OSP0DP75 135 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 UROSP10746 265 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ICAM2P13598 275 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 APEHP13798 732 aaKnown RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TCN1P20061 433 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 MAGP20916 626 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SLC15A1P46059 708 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SUMO3P55854 103 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 P2RX3P56373 397 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CSNK1G2P78368 415 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 XIAPP98170 497 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 PLOD1Q02809 727 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CACNG1Q06432 222 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 KLC1Q07866 573 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 DGCR6Q14129 220 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 E2F2Q14209 437 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 PTPRCAPQ14761 206 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TSC22D1Q15714 1073 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 PRSS53Q2L4Q9 553 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 DNAL1Q4LDG9 190 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 FBLN7Q53RD9 439 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TFDP3Q5H9I0 405 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF311Q5JNZ3 666 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ATG9BQ674R7 924 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CES3Q6UWW8 571 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 FRMD7Q6ZUT3 714 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 H2AFVQ71UI9 128 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 COX15Q7KZN9 410 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 ADCK2Q7Z695 626 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CCDC25Q86WR0 208 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 LINC00346Q8IVM7 164 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SIRT6Q8N6T7 355 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CHDHQ8NE62 594 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 STEAP2Q8NFT2 490 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 OR5AR1Q8NGP9 310 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 FLVCR1-AS1Q8TAF5 88 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 RAB3IL1Q8TBN0 382 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 LKAAEAR1Q8TD35 194 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 BRIX1Q8TDN6 353 aaKnown RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CD300LFQ8TDQ1 290 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 CA5BP1Q8WTZ4 195 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 TSEN15Q8WW01 171 aaKnown RBP6.33□□□□□ -1.4
HDAC3-209ENST00000486618 PSMF1Q92530 271 aa6.33□□□□□ -1.4
HDAC3-209ENST00000486618 SPSB4Q96A44 273 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms