RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 RABL3Q5HYI8 236 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 C6orf163Q5TEZ5 329 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 FCRLBQ6BAA4 426 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 MTFR2Q6P444 385 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 TMEM64Q6YI46 380 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 POGLUT1Q8NBL1 392 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 TMEM52Q8NDY8 209 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 SFXN5Q8TD22 340 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 ZFP90Q8TF47 636 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 SIGLEC12Q96PQ1 595 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 PNO1Q9NRX1 252 aaKnown RBP15.75■□□□□ 0.11
VIM-205ENST00000485947 SLC6A13Q9NSD5 602 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 SUCOQ9UBS9 1254 aaKnown RBP15.75■□□□□ 0.11
VIM-205ENST00000485947 SEC14L3Q9UDX4 400 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 OSGIN2Q9Y236 505 aa15.75■□□□□ 0.11
VIM-205ENST00000485947 CENPEQ02224 2701 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 SPENQ96T58 3664 aaKnown RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 CLIC1O00299 241 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 FGF17O60258 216 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 SLC25A12O75746 678 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 KRT75O95678 551 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 CPMP14384 443 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 GPC1P35052 558 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 SOAT1P35610 550 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 FEN1P39748 380 aaKnown RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 HSPB3Q12988 150 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 GAB1Q13480 694 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 SPINK14Q6IE38 97 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 GFRALQ6UXV0 394 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 ZNF551Q7Z340 670 aaPredicted RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 ANKRD9Q96BM1 317 aaPredicted RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 CLPTM1LQ96KA5 538 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 ECSITQ9BQ95 431 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 PELOQ9BRX2 385 aaKnown RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 SLC35A5Q9BS91 424 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 THUMPD3Q9BV44 507 aaKnown RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 SPATA9Q9BWV2 254 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 ALOXE3Q9BYJ1 711 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 MUC13Q9H3R2 512 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 ALG2Q9H553 416 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 CXorf36Q9H7Y0 433 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 TPT1P8Q9HAU6 139 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 SIRT3Q9NTG7 399 aaPredicted RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 SLC7A8Q9UHI5 535 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 ERVK-11Q9UQG0 969 aa15.74■□□□□ 0.11
VIM-205ENST00000485947 KLF13Q9Y2Y9 288 aaPredicted RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 YARS2Q9Y2Z4 477 aaKnown RBP15.74■□□□□ 0.11
VIM-205ENST00000485947 C2CD3Q4AC94 2353 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 TRBV11-1A0A0K0K1C0 115 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 PRORSD1PA6NEY8 169 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 WASHC1A8K0Z3 465 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 H0YHG0 523 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 DYRK3O43781 588 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 NME2P1O60361 137 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 MAN1A2O60476 641 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 LDB3O75112 727 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 PDE5AO76074 875 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 IFNA16P05015 189 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 ATP1B1P05026 303 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 SLC35E2P0CK97 266 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 GPX2P18283 190 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 NME2P22392 152 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 MAGEA8P43361 318 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 CDK9P50750 372 aaKnown RBP15.73■□□□□ 0.11
VIM-205ENST00000485947 MTPNP58546 118 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 BNIP2Q12982 314 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 HIST2H2BCQ6DN03 193 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 FAM180BQ6P0A1 224 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 BHLHB9Q6PI77 547 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 MAMDC2Q7Z304 686 aaPredicted RBP15.73■□□□□ 0.11
VIM-205ENST00000485947 NET1Q7Z628 596 aaPredicted RBP15.73■□□□□ 0.11
VIM-205ENST00000485947 CCDC116Q8IYX3 515 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 FAM13CQ8NE31 585 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 OR5L2Q8NGL0 311 aa15.73■□□□□ 0.11
VIM-205ENST00000485947 KAT8Q9H7Z6 458 aaKnown RBP15.73■□□□□ 0.11
VIM-205ENST00000485947 RNF103-CHMP3A0A140T963 221 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 A8MUA0 341 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 FAM220BPB1ANY3 271 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 KLRC4-KLRK1H3BQV0 150 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 TGFBR3LH3BV60 316 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 LRRTM2O43300 516 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 HTR1EP28566 365 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 GALNSP34059 522 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 CHI3L1P36222 383 aaPredicted RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 GSK3BP49841 420 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 CASP6P55212 293 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 TXNL4AP83876 142 aaKnown RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 ALDH6A1Q02252 535 aaKnown RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 LIPEQ05469 1076 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 DUSP2Q05923 314 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 TRAP1Q12931 704 aaKnown RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 FADDQ13158 208 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SELPLGQ14242 412 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SPDYE7PQ495Y7 208 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SAXO2Q658L1 398 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 HSDL2Q6YN16 418 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 GALNTL5Q7Z4T8 443 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SERPINA11Q86U17 422 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 TMEM156Q8N614 296 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 AMER2Q8N7J2 671 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms