RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 LRTM1Q9HBL6 345 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 EML4Q9HC35 981 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 SIRT3Q9NTG7 399 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 ACSS1Q9NUB1 689 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 OLAHQ9NV23 265 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 CNIH4Q9P003 139 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 COPS7AQ9UBW8 275 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ATP6V1HQ9UI12 483 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ERRFI1Q9UJM3 462 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 UTS2RQ9UKP6 389 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 VPS4AQ9UN37 437 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 C19orf53Q9UNZ5 99 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 KLF13Q9Y2Y9 288 aaPredicted RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 RAP2CQ9Y3L5 183 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 NPFFR2Q9Y5X5 522 aa5.25□□□□□ -1.57
CUX1-208ENST00000485792 ANKRD17O75179 2603 aaKnown RBP5.25□□□□□ -1.57
CUX1-208ENST00000485792 SPG11Q96JI7 2443 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CENPVL1A0A0U1RR11 272 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 TMEM120BA0PK00 339 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 FRG2CA6NGY1 282 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 OR6C70A6NIJ9 312 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 C9JVG2 144 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 KLRC4-KLRK1H3BQV0 150 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 UPK1AO00322 258 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ASNA1O43681 348 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 DYRK3O43781 588 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PEX1O43933 1283 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 TSPAN2O60636 221 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SEC22BO75396 215 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SKAP2O75563 359 aaPredicted RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 ERAL1O75616 437 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 IGKV1D-16P01601 117 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 GSTP1P09211 210 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 ALDOCP09972 364 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 RFPL3SP0C7P2 107 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 LINC00032P0C843 101 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PRPS2P11908 318 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 TNNI3P19429 210 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 BGNP21810 368 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ABCD3P28288 659 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 MPIP34949 423 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 FEN1P39748 380 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 ARL1P40616 181 aaPredicted RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 CASP3P42574 277 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CA7P43166 264 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ASMTP46597 345 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 MEOX1P50221 254 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 RPL14P50914 215 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 WNT3P56703 355 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CORO7P57737 925 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 GPR85P60893 370 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 BTKQ06187 659 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 C2orf80Q0P641 193 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 BST1Q10588 318 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SNTA1Q13424 505 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 EMC4Q5J8M3 183 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SH2D4BQ5SQS7 431 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 DCST1Q5T197 706 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SLC22A10Q63ZE4 541 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 FAM180AQ6UWF9 173 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 IL20RBQ6UXL0 311 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 OLIG3Q7RTU3 272 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 TICAM1Q8IUC6 712 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 SPPL2CQ8IUH8 684 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PRR22Q8IZ63 422 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 TMEM156Q8N614 296 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CCDC63Q8NA47 563 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ADCY4Q8NFM4 1077 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 OR9A2Q8NGT5 310 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CLHC1Q8NHS4 586 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 FAM110BQ8TC76 370 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CIDECQ96AQ7 238 aaPredicted RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 KLHL29Q96CT2 875 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ARSGQ96EG1 525 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 LCORQ96JN0 433 aaPredicted RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 TEX37Q96LM6 180 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PPP3R2Q96LZ3 170 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 FAM173AQ9BQD7 235 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 LMF2Q9BU23 707 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 ITPAQ9BY32 194 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ANGPTL4Q9BY76 406 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 REEP4Q9H6H4 257 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 AKTIPQ9H8T0 292 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 MEAF6Q9HAF1 191 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 IL1RL2Q9HB29 575 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 ACKR4Q9NPB9 350 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 GIN1Q9NXP7 522 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 QPCTLQ9NXS2 382 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 TNFRSF10DQ9UBN6 386 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CFL2Q9Y281 166 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 PCDHGB3Q9Y5G1 929 aa5.24□□□□□ -1.57
CUX1-208ENST00000485792 CHD3Q12873 2000 aaKnown RBP5.24□□□□□ -1.57
CUX1-208ENST00000485792 RAI1Q7Z5J4 1906 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 AKAP6Q13023 2319 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ATP6AP2A0A1C7CYW4 349 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 GNG14A0A1W2PPG7 69 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MEGF11A6BM72 1044 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms