RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 C3orf14Q9HBI5 128 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 IL1RAPQ9NPH3 570 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SMPD3Q9NY59 655 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 KCND3Q9UK17 655 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 POLHQ9Y253 713 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF451Q9Y4E5 1061 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ASB4Q9Y574 426 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NUP214P35658 2090 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 A0A1B0GX78 115 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 A0A1W2PR48 441 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HYKKA2RU49 373 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C7orf72A4D263 438 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C4orf51C9J302 202 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C9J4A7 227 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DSCR3O14972 297 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PROM1O43490 865 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SLC28A2O43868 658 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DNAJB6O75190 326 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PRSS23O95084 383 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 BMP10O95393 424 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 AIFM1O95831 613 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CELA2AP08217 269 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ARAFP10398 606 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PLA2G2AP14555 144 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ALOX12P18054 663 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CDH2P19022 906 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 FOLR3P41439 243 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MAGEA2P43356 314 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 KHKP50053 298 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ST13P50502 369 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RAD23AP54725 363 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ARSFP54793 590 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SELENOWP63302 87 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OLR1P78380 273 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DCDP81605 110 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MERTKQ12866 999 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TP53BP2Q13625 1128 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 RFX4Q33E94 735 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CYBRD1Q53TN4 286 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NHSL2Q5HYW2 709 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SAXO2Q658L1 398 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR2T5Q6IEZ7 315 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR52E8Q6IFG1 317 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 REEP3Q6NUK4 255 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM214Q6NUQ4 689 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NIPAL1Q6NVV3 410 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SLC48A1Q6P1K1 146 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MRPL14Q6P1L8 145 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CCDC80Q76M96 950 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF551Q7Z340 670 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PPP1R32Q7Z5V6 425 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MRGPREQ86SM8 312 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 EPHX4Q8IUS5 362 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 MMP21Q8N119 569 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 FAM86B1Q8N7N1 296 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TTC29Q8NA56 475 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 KCT2Q8NC54 265 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF555Q8NEP9 628 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR56A1Q8NGH5 318 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 OR2T29Q8NH02 315 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NFKBIDQ8NI38 313 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PSMA8Q8TAA3 256 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C9orf43Q8TAL5 461 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 FAM110BQ8TC76 370 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SPPL2AQ8TCT8 520 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SFXN5Q8TD22 340 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 UTP15Q8TED0 518 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 APOBEC4Q8WW27 367 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 CYGBQ8WWM9 190 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TBC1D20Q96BZ9 403 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 TM4SF19Q96DZ7 209 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HSH2DQ96JZ2 352 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 LRFN5Q96NI6 719 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF285Q96NJ3 590 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 AMDHD1Q96NU7 426 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF347Q96SE7 839 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF607Q96SK3 696 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 DOHHQ9BU89 302 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ADI1Q9BV57 179 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 SPATA5L1Q9BVQ7 753 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 NUDT9Q9BW91 350 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 YIPF2Q9BWQ6 316 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ANKRD60Q9BZ19 345 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 GLIPR2Q9H4G4 154 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 REEP1Q9H902 201 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PNPLA3Q9NST1 481 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZCCHC3Q9NUD5 404 aaKnown RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 HCN3Q9P1Z3 774 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 P2RX2Q9UBL9 471 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 GPN3Q9UHW5 284 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF639Q9UID6 485 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 C3orf18Q9UK00 162 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ERVK-11Q9UQG0 969 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 ATG4BQ9Y4P1 393 aa6.47□□□□□ -1.37
BRCA1-216ENST00000484087 PRRC2CQ9Y520 2896 aaKnown RBP6.46□□□□□ -1.37
BRCA1-216ENST00000484087 SPTA1P02549 2419 aa6.46□□□□□ -1.37
BRCA1-216ENST00000484087 MYO1GB0I1T2 1018 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms