RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 FKBP1BP68106 108 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 NAAAQ02083 359 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ID2Q02363 134 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 SLC18A2Q05940 514 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 IFFO1Q0D2I5 559 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 NFATC2Q13469 925 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 GK3PQ14409 553 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MELKQ14680 651 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 PTGISQ16647 500 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TATDN3Q17R31 274 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ITPRIPL2Q3MIP1 535 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ZNF528Q3MIS6 628 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 GGTA1PQ4G0N0 100 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LINC01620Q4KN68 170 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 C2CD6Q53TS8 623 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 C6orf226Q5I0X4 101 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 C6orf141Q5SZD1 244 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CEP85LQ5SZL2 805 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LGSNQ5TDP6 509 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TMEM268Q5VZI3 342 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 SLC18B1Q6NT16 456 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 RHBDD2Q6NTF9 364 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 NEPROQ6NW34 567 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 RFWD3Q6PCD5 774 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 METTL7BQ6UX53 244 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CLEC18BQ6UXF7 455 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ZNF841Q6ZN19 808 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 DPPA4Q7L190 304 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MRPL21Q7Z2W9 205 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 YTHDF3Q7Z739 585 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 DHDDSQ86SQ9 333 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TMPRSS11BQ86T26 416 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 KCNMB4Q86W47 210 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 KMT5CQ86Y97 462 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ZBED8Q8IZ13 594 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 RBFAQ8N0V3 343 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 FAM89BQ8N5H3 189 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 HORMAD2Q8N7B1 307 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ZNF611Q8N823 705 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CLEC18CQ8NCF0 446 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 OR9G4Q8NGQ1 327 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ACTL9Q8TC94 416 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 UBTD2Q8WUN7 234 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 SPRYD4Q8WW59 207 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 ESR2Q92731 530 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MOAP1Q96BY2 351 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LMLNQ96KR4 655 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CEP19Q96LK0 163 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 C12orf42Q96LP6 360 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MBOAT7Q96N66 472 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 SEPHS2Q99611 448 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CGREF1Q99674 301 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CMKLR1Q99788 373 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 C17orf62Q9BQA9 187 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MED10Q9BTT4 135 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LMF2Q9BU23 707 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 IFT27Q9BW83 186 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 FOXP1Q9H334 677 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 SNX25Q9H3E2 840 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ACTR5Q9H9F9 607 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 IL1RL2Q9HB29 575 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MCCC2Q9HCC0 563 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 Q9N2K0 584 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 OR2S2Q9NQN1 319 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 UFSP2Q9NUQ7 469 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TMEM45AQ9NWC5 275 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 PIPOXQ9P0Z9 390 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 DAPK2Q9UIK4 370 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ZNF346Q9UL40 294 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 SPATA2Q9UM82 520 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 FLVCR2Q9UPI3 526 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LAMP3Q9UQV4 416 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MEMO1Q9Y316 297 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 NPTNQ9Y639 398 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MST1RQ04912 1400 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ATP10DQ9P241 1426 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 SCRIBQ14160 1630 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TRBV5-3A0A0A0MS03 114 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ESYT2A0FGR8 921 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 ARHGEF33A8MVX0 844 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 A8MX80 341 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 E7ESA3 106 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 MKRN2OSH3BPM6 223 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 SGK494L7N484 410 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 RHODO00212 210 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 KCNN4O15554 427 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 UGDHO60701 494 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 PFKFB2O60825 505 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 NADKO95544 446 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 PGK1P00558 417 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 HMGN1P05114 100 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 OR4E1P0C645 316 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 DBTP11182 482 aaKnown RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 SYT1P21579 422 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 HLA-DMAP28067 261 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 HSD11B1P28845 292 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CDH5P33151 784 aaPredicted RBP3.76□□□□□ -1.81
VPS41-212ENST00000482217 MAGEA11P43364 429 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 CAPZBP47756 277 aa3.76□□□□□ -1.81
VPS41-212ENST00000482217 RIPK4P57078 832 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms