RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 FRKP42685 505 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 MANFP55145 182 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 NUP107P57740 925 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 ABCE1P61221 599 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 CRYZQ08257 329 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 DECR1Q16698 335 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 ZNF385BQ569K4 471 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 C6orf136Q5SQH8 315 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 C1orf185Q5T7R7 199 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 KIRREL3Q8IZU9 778 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 FNDC5Q8NAU1 212 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 OR4N2Q8NGD1 307 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 EFHD2Q96C19 240 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 TUBGCP3Q96CW5 907 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 DTNBP1Q96EV8 351 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 C3orf30Q96M34 536 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 C3orf14Q9HBI5 128 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 KCNK9Q9NPC2 374 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 ALKBH4Q9NXW9 302 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 GIMAP2Q9UG22 337 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 MRTO4Q9UKD2 239 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 MAPRE3Q9UPY8 281 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 RNF6Q9Y252 685 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 WIF1Q9Y5W5 379 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 UTP20O75691 2785 aaKnown RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 C2orf72A6NCS6 295 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ITM2AO43736 263 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 GLI4P10075 376 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 PRPS2P11908 318 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 COX6B1P14854 86 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 PSMD4P55036 377 aaKnown RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 MAD2L1Q13257 205 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 MPP2Q14168 576 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 PTGR1Q14914 329 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 VPS26BQ4G0F5 336 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 NHSL2Q5HYW2 709 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 WIPI1Q5MNZ9 446 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 IL23RQ5VWK5 629 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 CES4AQ5XG92 561 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 RTL6Q6ICC9 239 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 WDR53Q7Z5U6 358 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 PLCZ1Q86YW0 608 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 PM20D2Q8IYS1 436 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ULK2Q8IYT8 1036 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 WDSUB1Q8N9V3 476 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 CEP70Q8NHQ1 597 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ZBTB9Q96C00 473 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 MS4A4EQ96PG1 132 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 TIMP4Q99727 224 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 C1orf50Q9BV19 199 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 EQTNQ9NQ60 294 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 SERHLQ9NQF3 203 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ATAD3AQ9NVI7 634 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ATP6V1HQ9UI12 483 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 CBLCQ9ULV8 474 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 ABCG2Q9UNQ0 655 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 EIF3LQ9Y262 564 aaKnown RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-213ENST00000482192 RAP2CQ9Y3L5 183 aa10.84□□□□□ -0.67
HMGN1-213ENST00000482192 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 AHRRA9YTQ3 701 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 KCNH1O95259 989 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 IL33O95760 270 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 ACTL6AO96019 429 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 CYP4B1P13584 511 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 PRPS1L1P21108 318 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 BGNP21810 368 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 EVI2BP34910 448 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 SLC1A6P48664 564 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 RPL14P50914 215 aaKnown RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 PRR5P85299 388 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 GAB1Q13480 694 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 MLC1Q15049 377 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 SF3B4Q15427 424 aaKnown RBP eCLIP10.83□□□□□ -0.687e-15■■■■□ 20.5
HMGN1-213ENST00000482192 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 EIPR1Q53HC9 387 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 CPTPQ5TA50 214 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 SZRD1Q7Z422 152 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 CCDC71Q8IV32 467 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 NATD1Q8N6N6 113 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 CDRT4Q8N9R6 151 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 OR10Q1Q8NGQ4 319 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 OR14L1PQ8NHC6 308 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 LILRB4Q8NHJ6 448 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 HOXB13Q92826 284 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 PRPF18Q99633 342 aaKnown RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 PRDM14Q9GZV8 571 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 ZNF395Q9H8N7 513 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 FAM120CQ9NX05 1096 aaKnown RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 ASIC5Q9NY37 505 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 NOP53Q9NZM5 478 aaKnown RBP10.83□□□□□ -0.68
HMGN1-213ENST00000482192 NTMQ9P121 344 aa10.83□□□□□ -0.68
HMGN1-213ENST00000482192 SLC6A5Q9Y345 797 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms