RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	ANKRD42	Q8N9B4	389 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	WDSUB1	Q8N9V3	476 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	FNDC5	Q8NAU1	212 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	OR7A2P	Q8NGA2	310 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	MARVELD3	Q96A59	401 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	SARAF	Q96BY9	339 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	TUBGCP3	Q96CW5	907 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	PGM2	Q96G03	612 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	SLC35A4	Q96G79	324 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	PPP3R2	Q96LZ3	170 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	PAIP2	Q9BPZ3	127 aa	Known RBP	11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	SERHL	Q9NQF3	203 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	FLRT3	Q9NZU0	649 aa		11.75	□□□□□ -0.53
ABCF3-215	ENST00000481116	UNC79	Q9P2D8	2635 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	DOCK7	Q96N67	2140 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	GXYLT2	A0PJZ3	443 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	NKX2-6	A6NCS4	301 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116		B4DXG7	233 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	SNPH	O15079	494 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	BIRC5	O15392	142 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TBX19	O60806	448 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	HPN	P05981	417 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TUBB	P07437	444 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	GLI4	P10075	376 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	FRK	P42685	505 aa	Predicted RBP	11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	KIR3DL1	P43629	444 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	ASMT	P46597	345 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	RFX3	P48380	749 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	SLC1A6	P48664	564 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	PNLIPRP2	P54317	469 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	MANF	P55145	182 aa	Known RBP	11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	WNT3	P56703	355 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	PTGR1	Q14914	329 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	ATP6AP1L	Q52LC2	224 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	DCST1	Q5T197	706 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	IL23R	Q5VWK5	629 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TMEM81	Q6P7N7	255 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	SZRD1	Q7Z422	152 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	KRTCAP2	Q8N6L1	136 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	OR10Q1	Q8NGQ4	319 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	FBXO30	Q8TB52	745 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	CA5BP1	Q8WTZ4	195 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	PIK3R3	Q92569	461 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	RND1	Q92730	232 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TMCO6	Q96DC7	493 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	SORT1	Q99523	831 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TIMP4	Q99727	224 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	TTYH2	Q9BSA4	534 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	UCK2	Q9BZX2	261 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	COQ3	Q9NZJ6	369 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	CBLC	Q9ULV8	474 aa		11.74	□□□□□ -0.53
ABCF3-215	ENST00000481116	FIGNL2	A6NMB9	653 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	FAM90A27P	A6NNH2	459 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	TMEM114	B3SHH9	223 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	SCAMP2	O15127	329 aa	Known RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	SCO2	O43819	266 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	SLITRK5	O94991	958 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ZWINT	O95229	277 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	IGKV1D-16	P01601	117 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	MYZAP	P0CAP1	466 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	LAMP1	P11279	417 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	PRPS2	P11908	318 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	BMP7	P18075	431 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	TCEA1	P23193	301 aa	Known RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	MAPK1	P28482	360 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	GABRA3	P34903	492 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	GAS1	P54826	345 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	CRYZ	Q08257	329 aa	Known RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	SNTA1	Q13424	505 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	EFR3A	Q14156	821 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ITPR2	Q14571	2701 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	C1orf185	Q5T7R7	199 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	B3GNT6	Q6ZMB0	384 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	GALNT10	Q86SR1	603 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ULK2	Q8IYT8	1036 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	INTS1	Q8N201	2190 aa	Known RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	NUP43	Q8NFH3	380 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	MGARP	Q8TDB4	240 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	OTUB1	Q96FW1	271 aa	Predicted RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	C16orf58	Q96GQ5	468 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ZNF764	Q96H86	408 aa	Predicted RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	YIPF4	Q9BSR8	244 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	LMF2	Q9BU23	707 aa	Known RBP	11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	UGT2B28	Q9BY64	529 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	RTN4R	Q9BZR6	473 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	PKDREJ	Q9NTG1	2253 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	PNPO	Q9NVS9	261 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ATP6V1H	Q9UI12	483 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	FBXL2	Q9UKC9	423 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	WIF1	Q9Y5W5	379 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	ACTL7B	Q9Y614	415 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	MAST4	O15021	2626 aa		11.73	□□□□□ -0.53
ABCF3-215	ENST00000481116	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.72	□□□□□ -0.53
ABCF3-215	ENST00000481116		A0A0G2JNJ9	132 aa		11.72	□□□□□ -0.53
ABCF3-215	ENST00000481116	HNRNPR	O43390	633 aa	Known RBP	11.72	□□□□□ -0.53
ABCF3-215	ENST00000481116	ABCB7	O75027	752 aa		11.72	□□□□□ -0.53
ABCF3-215	ENST00000481116	WDR1	O75083	606 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms