RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ACMSDQ8TDX5 336 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 DTNBP1Q96EV8 351 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 VSTM2LQ96N03 204 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 FOXC2Q99958 501 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 GSTO2Q9H4Y5 243 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 EDARQ9UNE0 448 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 RPH3AQ9Y2J0 694 aaPredicted RBP13.85□□□□□ -0.19
LIMS3-203ENST00000480744 MTORP42345 2549 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 SCO2O43819 266 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 TSPAN2O60636 221 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 CRCPO75575 148 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 IL18BPO95998 194 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 JUNP05412 331 aaKnown RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 MYL2P10916 166 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 CD99P14209 185 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 GRK2P25098 689 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 NCBP2P52298 156 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 FOXA1P55317 472 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 ZNF763Q0D2J5 394 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 AAGABQ6PD74 315 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 LUZP2Q86TE4 346 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 GCNT2Q8N0V5 402 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 CHDHQ8NE62 594 aaPredicted RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 OR4K17Q8NGC6 315 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 OR4N2Q8NGD1 307 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 TM9SF2Q99805 663 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 RBM24Q9BX46 236 aaKnown RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 TAS2R9Q9NYW1 312 aa13.84□□□□□ -0.19
LIMS3-203ENST00000480744 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 V9GYY5 206 aaPredicted RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 MAP1AP78559 2803 aaPredicted RBP13.84□□□□□ -0.19
LIMS3-203ENST00000480744 FAM221AA4D161 298 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 C17orf51A8MQB3 221 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 UBFD1O14562 309 aaKnown RBP13.83□□□□□ -0.2
LIMS3-203ENST00000480744 PLOD3O60568 738 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 COQ9O75208 318 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 EPXP11678 715 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 DDCP20711 480 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 DPP4P27487 766 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 MC3RP41968 323 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 GSTM5P46439 218 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 LHX2P50458 406 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 PNLIPRP2P54317 469 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 GFRA1P56159 465 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 PPP2R2AP63151 447 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 PSPHP78330 225 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 MRPS22P82650 360 aaKnown RBP13.83□□□□□ -0.2
LIMS3-203ENST00000480744 DAZAP2Q15038 168 aaPredicted RBP13.83□□□□□ -0.2
LIMS3-203ENST00000480744 GALNT18Q6P9A2 607 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 TMEM107Q6UX40 140 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 GRAMD2AQ8IUY3 354 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 WNT2BQ93097 391 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 ZFP3Q96NJ6 502 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 YIPF4Q9BSR8 244 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 SFXN3Q9BWM7 321 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
LIMS3-203ENST00000480744 JKAMPQ9P055 326 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 PPP4R1LQ9P1A2 415 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 DCDC2Q9UHG0 476 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 EMCNQ9ULC0 261 aa13.83□□□□□ -0.2
LIMS3-203ENST00000480744 POLR3HQ9Y535 204 aaPredicted RBP13.83□□□□□ -0.2
LIMS3-203ENST00000480744 A0A1W2PPM1 405 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 MYO1GB0I1T2 1018 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 PLOD2O00469 737 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 GLRA3O75311 464 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 RCBTB2O95199 551 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
LIMS3-203ENST00000480744 NTSP30990 170 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 VSNL1P62760 191 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 SORDQ00796 357 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 STX5Q13190 355 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 POU4F3Q15319 338 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 PRSS53Q2L4Q9 553 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 CFAP157Q5JU67 520 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 ZYG11AQ6WRX3 759 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 CHMP1BQ7LBR1 199 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 P4HA3Q7Z4N8 544 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 TGIF2LYQ8IUE0 185 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 UBQLNLQ8IYU4 475 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 CCDC126Q96EE4 140 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 G6PC3Q9BUM1 346 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 SHCBP1LQ9BZQ2 653 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 CXXC4Q9H2H0 198 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 ACBD3Q9H3P7 528 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 GALNT8Q9NY28 637 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 CLCF1Q9UBD9 225 aa13.82□□□□□ -0.2
LIMS3-203ENST00000480744 SERTM1A2A2V5 107 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 G3V2L1 256 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 ZNF708P17019 499 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 EVI2BP34910 448 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 CPOXP36551 454 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 RFX3P48380 749 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 GAS1P54826 345 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 CLDN18P56856 261 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 PSG6Q00889 435 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 RAET1LQ5VY80 246 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 PAMR1Q6UXH9 720 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms