RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CCL5P13501 91 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 NRLP54845 237 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CLDN8P56748 225 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 PTPRCAPQ14761 206 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 AARDQ4LEZ3 155 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 UPRTQ96BW1 309 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 PAPOLGQ9BWT3 736 aaKnown RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CPNE5Q9HCH3 593 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 MAST2Q6P0Q8 1798 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 DENRO43583 198 aaKnown RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CRABP1P29762 137 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CHRNB4P30926 498 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 SPHARQ15513 63 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 DEFB134Q4QY38 66 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 FAM205BPQ63HN1 556 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 TSPYL5Q86VY4 417 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 MSANTD3Q96H12 275 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ARHGAP39Q9C0H5 1083 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 HIPK2Q9H2X6 1198 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 EDARQ9UNE0 448 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 WNT7AO00755 349 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CASC3O15234 703 aaKnown RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ADAP00813 363 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 C5AR1P21730 350 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ETV6P41212 452 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 MC3RP41968 323 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CX3CR1P49238 355 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 LRRC37A5PQ49AS3 106 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 METTL11BQ5VVY1 283 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF529Q6P280 563 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 NXPE4Q6UWF7 544 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 MINDY1Q8N5J2 469 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 MYADMQ96S97 322 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 BEX2Q9BXY8 128 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 BEX1Q9HBH7 125 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 H3BSA7 217 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ATE1O95260 518 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 PCBD1P61457 104 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CYP27C1Q4G0S4 372 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CLVS2Q5SYC1 327 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF852Q6ZMS4 543 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 PRSS48Q7RTY5 328 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 DCP2Q8IU60 420 aaKnown RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 GTPBP8Q8N3Z3 284 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF587Q96SQ5 575 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 DOCK8Q8NF50 2099 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 SLC1A7O00341 560 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 TP53P04637 393 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 SSX3Q99909 188 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 OR2S2Q9NQN1 319 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 C10orf71Q711Q0 1435 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 TCRBV7S3A2A0A539 114 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 LDB2O43679 373 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 ADAMTS4O75173 837 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 CNOT4O95628 575 aaKnown RBP9.08□□□□□ -0.96
VEGFA-212ENST00000480614 AMY2AP04746 511 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 C6orf89Q6UWU4 347 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 UMODL1-AS1Q8N2C9 162 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 KRTCAP2Q8N6L1 136 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 IKZF4Q9H2S9 585 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 GPATCH2Q9NW75 528 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 A0A1W2PP55 124 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 TMEM107Q6UX40 140 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 BCAS3Q9H6U6 928 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 AIG1Q9NVV5 245 aa9.08□□□□□ -0.96
VEGFA-212ENST00000480614 TCRBV21S2A2A0A5A6 115 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 BLOC1S3Q6QNY0 202 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 TMPRSS9Q7Z410 1059 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 TEPSINQ96N21 525 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 SERPINE2P07093 398 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 CREB1P16220 341 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 NSDHLQ15738 373 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 TCTEX1D2Q8WW35 142 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 TANKQ92844 425 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 SLC2A6Q9UGQ3 507 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 CICQ96RK0 1608 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-212ENST00000480614 GPR137BO60478 399 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 LSSP48449 732 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 CRYZQ08257 329 aaKnown RBP9.07□□□□□ -0.96
VEGFA-212ENST00000480614 GK2Q14410 553 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-212ENST00000480614 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 AMDHD1Q96NU7 426 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 APOC3P02656 99 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 PCGF2P35227 344 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 NIPAL4Q0D2K0 466 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 GPR157Q5UAW9 335 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 RAB8BQ92930 207 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 SCLYQ96I15 445 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 NDUFAF4Q9P032 175 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 TAF1P21675 1872 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 RNGTTO60942 597 aaKnown RBP9.07□□□□□ -0.96
VEGFA-212ENST00000480614 OR8U9P0C7N5 309 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 GDF5P43026 501 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 MTNR1AP48039 350 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 FNDC9Q8TBE3 224 aa9.07□□□□□ -0.96
VEGFA-212ENST00000480614 FAIMQ9NVQ4 179 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms