RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 UMPSP11172 480 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 CRYBA2P53672 197 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 RNF4P78317 190 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 CHRNEQ04844 493 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 PUM1Q14671 1186 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■□□□ 11.4
UPF3A-206ENST00000480362 NNATQ16517 81 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 FIGNL1Q6PIW4 674 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 ENPP6Q6UWR7 440 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 HSDL2Q6YN16 418 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 NDUFAF7Q7L592 441 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 EID3Q8N140 333 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 ZSCAN1Q8NBB4 408 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 CANT1Q8WVQ1 401 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 KIAA1143Q96AT1 154 aaPredicted RBP16.28■□□□□ 0.2
UPF3A-206ENST00000480362 NXPE2Q96DL1 559 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
UPF3A-206ENST00000480362 LCORQ96JN0 433 aaPredicted RBP16.28■□□□□ 0.2
UPF3A-206ENST00000480362 ZNF607Q96SK3 696 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 WWTR1Q9GZV5 400 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 NXF5Q9H1B4 397 aaKnown RBP16.28■□□□□ 0.2
UPF3A-206ENST00000480362 SLC38A1Q9H2H9 487 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 GPN2Q9H9Y4 310 aaPredicted RBP16.28■□□□□ 0.2
UPF3A-206ENST00000480362 S100A14Q9HCY8 104 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 FBXO34Q9NWN3 711 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 IL17BQ9UHF5 180 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 RPS6KA6Q9UK32 745 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 OR10H1Q9Y4A9 318 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 V9GYQ6 96 aa16.28■□□□□ 0.2
UPF3A-206ENST00000480362 NSG1A0A0A6YYJ2 146 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 TRBV11-1A0A0K0K1C0 115 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 DHRS12A0PJE2 317 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 FRG2CA6NGY1 282 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 FCMRO60667 390 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 STX11O75558 287 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 PDE9AO76083 593 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 PRKD3O94806 890 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 ZIC2O95409 532 aaPredicted RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 ZNF682O95780 498 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 IFNA14P01570 189 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 SPINK2P20155 84 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 NR0B1P51843 470 aaKnown RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 HPCAP84074 193 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 RIPK1Q13546 671 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 IL10RAQ13651 578 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 EXT1Q16394 746 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 BTBD16Q32M84 506 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 CYBRD1Q53TN4 286 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 AAGABQ6PD74 315 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 FRRS1Q6ZNA5 592 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 CBLL1Q75N03 491 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 EIF3MQ7L2H7 374 aaKnown RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 ADGRG5Q8IZF4 528 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 FAM86B1Q8N7N1 296 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 OR10Q1Q8NGQ4 319 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 FAM110BQ8TC76 370 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 SLCO4A1Q96BD0 722 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 NACC2Q96BF6 587 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 TAMM41Q96BW9 452 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 DUS3LQ96G46 650 aaKnown RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 COL21A1Q96P44 957 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 SEPHS2Q99611 448 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 UGT2B28Q9BY64 529 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 WDR70Q9NW82 654 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 CBLCQ9ULV8 474 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 SAMD4AQ9UPU9 718 aaKnown RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 WDR45Q9Y484 360 aa16.27■□□□□ 0.2
UPF3A-206ENST00000480362 GPC6Q9Y625 555 aaPredicted RBP16.27■□□□□ 0.2
UPF3A-206ENST00000480362 CNOT1A5YKK6 2376 aaKnown RBP16.27■□□□□ 0.19
UPF3A-206ENST00000480362 CEP250Q9BV73 2442 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 H0Y3Z8 333 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 SERPINB7O75635 380 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 MFN2O95140 757 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 IGKV1D-16P01601 117 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 GPIP06744 558 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ETS2P15036 469 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 PSMA4P25789 261 aaKnown RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 SLC7A1P30825 629 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 PIGAP37287 484 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 RFX3P48380 749 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 SELENOWP63302 87 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ELOAQ14241 798 aaKnown RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 CYP27C1Q4G0S4 372 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 TYW3Q6IPR3 259 aaKnown RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ZFP1Q6P2D0 407 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 KRT73Q86Y46 540 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 BCORP1Q8N888 145 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF441Q8N8Z8 693 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 OR5L2Q8NGL0 311 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 OR8K3Q8NH51 312 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 M1APQ8TC57 530 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ELP5Q8TE02 316 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 PYURFQ96I23 114 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 TPD52L3Q96J77 140 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 VPS50Q96JG6 964 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 RNF145Q96MT1 663 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 SCNM1Q9BWG6 230 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF350Q9GZX5 532 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms