RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 COL21A1Q96P44 957 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 SLC35A5Q9BS91 424 aa18.15■□□□□ 0.5
LIME1-205ENST00000480139 CNOT11Q9UKZ1 510 aaKnown RBP18.15■□□□□ 0.5
LIME1-205ENST00000480139 DUXAA6NLW8 204 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 TTLL8A6PVC2 850 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 CCL3P10147 92 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 CNR1P21554 472 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 PTPN6P29350 595 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 IL12BP29460 328 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 MAGEA8P43361 318 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 TXNL4AP83876 142 aaKnown RBP18.14■□□□□ 0.49
LIME1-205ENST00000480139 C19orf57Q0VDD7 668 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 COLEC12Q5KU26 742 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 SULF2Q8IWU5 870 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 BCORP1Q8N888 145 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 POGLUT1Q8NBL1 392 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 FAM110BQ8TC76 370 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 ADAMTS15Q8TE58 950 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 JADE3Q92613 823 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 SLC35G5Q96KT7 338 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 BARD1Q99728 777 aaKnown RBP18.14■□□□□ 0.49
LIME1-205ENST00000480139 FAM107BQ9H098 131 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 EPN3Q9H201 632 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 PCDHGB3Q9Y5G1 929 aa18.14■□□□□ 0.49
LIME1-205ENST00000480139 A0A096LPI6 279 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 ASNA1O43681 348 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 PEX1O43933 1283 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 CCDC22O60826 627 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 SHOX2O60902 331 aaPredicted RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 UGT2B11O75310 529 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 REM1O75628 298 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 IL33O95760 270 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 CHI3L1P36222 383 aaPredicted RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 SNTA1Q13424 505 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 C6orf10Q5SRN2 563 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 LRIF1Q5T3J3 769 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 SLC2A7Q6PXP3 512 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 ZNF621Q6ZSS3 439 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 CLEC4FQ8N1N0 589 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 COX18Q8N8Q8 333 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 ZFP62Q8NB50 900 aaPredicted RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 OR5M3Q8NGP4 307 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 FBXO30Q8TB52 745 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 RNF138Q8WVD3 245 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 PIK3R3Q92569 461 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 NTNG2Q96CW9 530 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 TMCO6Q96DC7 493 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 SNRNP40Q96DI7 357 aaKnown RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 TAAR6Q96RI8 345 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 ADOQ96SZ5 270 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 FAM173AQ9BQD7 235 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 YIPF4Q9BSR8 244 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 BTBD2Q9BX70 525 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 PAIP1Q9H074 479 aaKnown RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 SERHL2Q9H4I8 314 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 DEPPQ9NTK1 212 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 EML6Q6ZMW3 1958 aa18.13■□□□□ 0.49
LIME1-205ENST00000480139 SPENQ96T58 3664 aaKnown RBP18.13■□□□□ 0.49
LIME1-205ENST00000480139 GXYLT2A0PJZ3 443 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 ANP32DO95626 131 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 KRT75O95678 551 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 AGR2O95994 175 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 CRYABP02511 175 aaKnown RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 GSNP06396 782 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 HOXB9P17482 250 aaPredicted RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 MATN1P21941 496 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 LCN1P31025 176 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 MEOX1P50221 254 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 KLF10Q13118 480 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 UBAP2LQ14157 1087 aaKnown RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 INPP5JQ15735 1006 aaPredicted RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.12■□□□□ 0.49
LIME1-205ENST00000480139 FAM180AQ6UWF9 173 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 GK5Q6ZS86 529 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 PIGWQ7Z7B1 504 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 CISD2Q8N5K1 135 aaKnown RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 OR2M7Q8NG81 312 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 ZFP90Q8TF47 636 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 RMND5BQ96G75 393 aaPredicted RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 FRMD6Q96NE9 622 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 OR7D2Q96RA2 312 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 ANGPTL4Q9BY76 406 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 NMUR2Q9GZQ4 415 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 SLC6A13Q9NSD5 602 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 LEF1Q9UJU2 399 aaPredicted RBP18.12■□□□□ 0.49
LIME1-205ENST00000480139 ADAM21Q9UKJ8 722 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 NTNG1Q9Y2I2 539 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 NDUFAF1Q9Y375 327 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 GMEB1Q9Y692 573 aa18.12■□□□□ 0.49
LIME1-205ENST00000480139 KCNK2O95069 426 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 AK1P00568 194 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 SNRPB2P08579 225 aaKnown RBP18.11■□□□□ 0.49
LIME1-205ENST00000480139 CD1EP15812 388 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 CASP3P42574 277 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 KHKP50053 298 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 RPS26P62854 115 aaKnown RBP18.11■□□□□ 0.49
LIME1-205ENST00000480139 POU6F2P78424 691 aaPredicted RBP18.11■□□□□ 0.49
LIME1-205ENST00000480139 MAPRE2Q15555 327 aa18.11■□□□□ 0.49
LIME1-205ENST00000480139 DNAJC14Q6Y2X3 702 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms