RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF235Q14590 738 aa20■□□□□ 0.79
SDF4-206ENST00000478938 SYTL3Q4VX76 610 aa20■□□□□ 0.79
SDF4-206ENST00000478938 TMEM255AQ5JRV8 349 aa20■□□□□ 0.79
SDF4-206ENST00000478938 ACSM5Q6NUN0 579 aa20■□□□□ 0.79
SDF4-206ENST00000478938 CMIPQ8IY22 773 aa20■□□□□ 0.79
SDF4-206ENST00000478938 KRT78Q8N1N4 520 aa20■□□□□ 0.79
SDF4-206ENST00000478938 HDDC3Q8N4P3 179 aa20■□□□□ 0.79
SDF4-206ENST00000478938 HJURPQ8NCD3 748 aaPredicted RBP20■□□□□ 0.79
SDF4-206ENST00000478938 TRIB3Q96RU7 358 aa20■□□□□ 0.79
SDF4-206ENST00000478938 FUZQ9BT04 418 aa20■□□□□ 0.79
SDF4-206ENST00000478938 PRMT8Q9NR22 394 aaPredicted RBP20■□□□□ 0.79
SDF4-206ENST00000478938 MKL2Q9ULH7 1088 aa20■□□□□ 0.79
SDF4-206ENST00000478938 ST3GAL5Q9UNP4 418 aa20■□□□□ 0.79
SDF4-206ENST00000478938 AP1M2Q9Y6Q5 423 aa20■□□□□ 0.79
SDF4-206ENST00000478938 OR2M5A3KFT3 312 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 SULT1C2O00338 296 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 STK16O75716 305 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 SERPINA3P01011 423 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 IFNW1P05000 195 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 S100PP25815 95 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 ATP5C1P36542 298 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 RAP2BP61225 183 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 OC90Q02509 493 aaPredicted RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 AVPI1Q5T686 147 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 HACD4Q5VWC8 232 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 TMEM17Q86X19 198 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 TRMT10AQ8TBZ6 339 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 LCORQ96JN0 433 aaPredicted RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 RBM14Q96PK6 669 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 TMPRSS13Q9BYE2 586 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 CIPCQ9C0C6 399 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 NANSQ9NR45 359 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 MED11Q9P086 117 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 ACP2P11117 423 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 ACVRL1P37023 503 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 EOGTQ5NDL2 527 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 ESPNLQ6ZVH7 1005 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 TECPR1Q7Z6L1 1165 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 DMBX1Q8NFW5 382 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 PHOSPHO2Q8TCD6 241 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 GNPDA2Q8TDQ7 276 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 MRPS31Q92665 395 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 MS4A4EQ96PG1 132 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 POLDIP3Q9BY77 421 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 BTBD1Q9H0C5 482 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 QRSL1Q9H0R6 528 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 DHCR7Q9UBM7 475 aaKnown RBP19.99■□□□□ 0.79
SDF4-206ENST00000478938 CORO2BQ9UQ03 480 aa19.99■□□□□ 0.79
SDF4-206ENST00000478938 C2orf81A6NN90 581 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 ARHGEF33A8MVX0 844 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 ARPC1BO15143 372 aaKnown RBP19.98■□□□□ 0.79
SDF4-206ENST00000478938 AKR1C2P52895 323 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 AKR1C1Q04828 323 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 GINS1Q14691 196 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 FAM27D1Q5T7N8 215 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 PRSS45Q7RTY3 260 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 TSPAN33Q86UF1 283 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 NPAS3Q8IXF0 933 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 RXFP4Q8TDU9 374 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 CSGALNACT1Q8TDX6 532 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 GAREM1Q9H706 876 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 AUNIPQ9H7T9 357 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 FGF20Q9NP95 211 aaPredicted RBP19.98■□□□□ 0.79
SDF4-206ENST00000478938 OR6C74A6NCV1 312 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 KPNA3O00505 521 aaPredicted RBP19.98■□□□□ 0.79
SDF4-206ENST00000478938 ADAM12O43184 909 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 SH3BGRLO75368 114 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 HIST1H2ABP04908 130 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 KLK3P07288 261 aaPredicted RBP19.98■□□□□ 0.79
SDF4-206ENST00000478938 FPR3P25089 353 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 DUSP4Q13115 394 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 KLF9Q13886 244 aaPredicted RBP19.98■□□□□ 0.79
SDF4-206ENST00000478938 HIST3H2AQ7L7L0 130 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 GPR156Q8NFN8 814 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 HIST1H2ACQ93077 130 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 TCEAL4Q96EI5 215 aa19.98■□□□□ 0.79
SDF4-206ENST00000478938 ABHD14A-ACY1A0A1B0GW23 586 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 TMEM82A0PJX8 343 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 PIP5K1CO60331 668 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 ELAVL4P26378 380 aaKnown RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 SLC1A3P43003 542 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 RAB40BQ12829 278 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 ZNF155Q12901 538 aaPredicted RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 BOP1Q14137 746 aaKnown RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 SLC30A6Q6NXT4 461 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 PGBD2Q6P3X8 592 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 SPSB2Q99619 263 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 P2RY12Q9H244 342 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 PTGFRNQ9P2B2 879 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 KCND3Q9UK17 655 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 KCNE1BA0A087WTH5 132 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 SMAD6O43541 496 aaKnown RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 CDC123O75794 336 aaPredicted RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 SHC1P29353 583 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 TRAM2Q15035 370 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 MANEAQ5SRI9 462 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 PTRHD1Q6GMV3 140 aaKnown RBP19.97■□□□□ 0.79
SDF4-206ENST00000478938 ZNF425Q6IV72 752 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 SMARCD1Q96GM5 515 aa19.97■□□□□ 0.79
SDF4-206ENST00000478938 CPEB1Q9BZB8 566 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms