RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 HOOK1Q9UJC3 728 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 MRTO4Q9UKD2 239 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 EXOGQ9Y2C4 368 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 PLEKHA6Q9Y2H5 1048 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 COL4A6Q14031 1691 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 TDRD15B5MCY1 1934 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 IGHV3-38A0A0C4DH36 116 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 F5H6K3 240 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 H7C423 109 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 TRAFD1O14545 582 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 INPP4BO15327 924 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 SSX5O60225 188 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR6A2O95222 327 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 IGHDP01880 384 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZSCAN5DPP0CG00 497 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 PDHBP11177 359 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 TOP1P11387 765 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCNA2P20248 432 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 CYP2B6P20813 491 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 PDHA2P29803 388 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 PKLRP30613 574 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 FCGR2BP31994 310 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 FCGR2CP31995 323 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 CD86P42081 329 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC1A4P43007 532 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 RABIFP47224 123 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCL11P51671 97 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 TMEM50BP56557 158 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 KLRC3Q07444 240 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF177Q13360 481 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 EXOSC7Q15024 291 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF239Q16600 458 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 IMMTQ16891 758 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 WSCD2Q2TBF2 565 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 HIST2H2AA3Q6FI13 130 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPINK14Q6IE38 97 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 LCLAT1Q6UWP7 414 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 Q71RC1 249 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ITIH5Q86UX2 942 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC22A16Q86VW1 577 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZFAND4Q86XD8 727 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 TBC1D10CQ8IV04 446 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 WDR49Q8IV35 697 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF440Q8IYI8 595 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 GVQW1Q8N7I0 195 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 COLGALT1Q8NBJ5 622 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 LEMD2Q8NC56 503 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR2T6Q8NHC8 308 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ATP8B4Q8TF62 1192 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 FAM222BQ8WU58 562 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 LIPHQ8WWY8 451 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ESAMQ96AP7 390 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 MRPL38Q96DV4 380 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 C14orf79Q96F83 325 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 PCED1BQ96HM7 432 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 DEFB118Q96PH6 123 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 IWS1Q96ST2 819 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 KCNK16Q96T55 309 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 FGFBP2Q9BYJ0 223 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ATG10Q9H0Y0 220 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 ABCG4Q9H172 646 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 PARLQ9H300 379 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 C11orf49Q9H6J7 331 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 NMUR1Q9HB89 426 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 UBE2TQ9NPD8 197 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 RPS10P5Q9NQ39 176 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC7A10Q9NS82 523 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 HOMER3Q9NSC5 361 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 VPS54Q9P1Q0 977 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 CLIP2Q9UDT6 1046 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 DIMT1Q9UNQ2 313 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 UBE4BO95155 1302 aa3.34□□□□□ -1.87
CDC42BPA-212ENST00000478573 NID2Q14112 1375 aa3.34□□□□□ -1.88
CDC42BPA-212ENST00000478573 DNAH12Q6ZR08 3092 aa3.34□□□□□ -1.88
CDC42BPA-212ENST00000478573 IGLV7-46A0A075B6I9 117 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 YJEFN3A6XGL0 299 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 KPNA7A9QM74 516 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 B4GAT1O43505 415 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 KIAA0513O60268 411 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 RANBP6O60518 1105 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 STAM2O75886 525 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 REC8O95072 547 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 MT-ATP6P00846 226 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 LYNP07948 512 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ETS1P14921 441 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CHMLP26374 656 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 MARCKSP29966 332 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASMTP46597 345 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 NUMBP49757 651 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 LIMK2P53671 638 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ABCE1P61221 599 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CDKL1Q00532 357 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 KIAA0141Q14154 515 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM189A2Q15884 450 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CCL14Q16627 93 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 UPP1Q16831 310 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms