RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KCNK10P57789 538 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PHC1P78364 1004 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PSG6Q00889 435 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 MLC1Q15049 377 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DECR1Q16698 335 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GSTA3Q16772 222 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 VPS26BQ4G0F5 336 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ANXA8L1Q5VT79 327 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 MFSD12Q6NUT3 480 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ANGPTL8Q6UXH0 198 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GFRALQ6UXV0 394 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DNAJC14Q6Y2X3 702 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 NATD1Q8N6N6 113 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CDRT4Q8N9R6 151 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GALNT11Q8NCW6 608 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 VPS37AQ8NEZ2 397 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 OR56A1Q8NGH5 318 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GIMAP5Q96F15 307 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 C16orf58Q96GQ5 468 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 OR52E6Q96RD3 313 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SLX1AQ9BQ83 275 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TTTY12Q9BZ98 90 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GALNT9Q9HCQ5 603 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SH2D2AQ9NP31 389 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ASH1LQ9NR48 2969 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 FAM120CQ9NX05 1096 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TUBA8Q9NY65 449 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CBLCQ9ULV8 474 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PCDHGB4Q9UN71 923 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 MYO7BQ6PIF6 2116 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 NBPF19A0A087WUL8 3843 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PRSS51A0A1B0GVH4 220 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ACOT7O00154 380 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TO15178 435 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ZNHIT1O43257 154 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ICOSLGO75144 302 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 WISP2O76076 250 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 KCNH1O95259 989 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 WISP1O95388 367 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 IFI6P09912 130 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ALOX5P09917 674 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TROVE2P10155 538 aaKnown RBP eCLIP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 EDN3P14138 238 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 NCF2P19878 526 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CNR1P21554 472 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CHI3L1P36222 383 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 MDH1P40925 334 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TDGF1P3P51864 188 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 POLR2JP52435 117 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PPIAP62937 165 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 RPP38P78345 283 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 HSF1Q00613 529 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GAB1Q13480 694 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 DUSP5Q16690 384 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF324BQ6AW86 544 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 COX18Q8N8Q8 333 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ZFP62Q8NB50 900 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 POGLUT1Q8NBL1 392 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 GLB1L3Q8NCI6 653 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SLC16A11Q8NCK7 471 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ST6GALNAC3Q8NDV1 305 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PRR7Q8TB68 274 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SPPL2AQ8TCT8 520 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SFXN5Q8TD22 340 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CDS1Q92903 461 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 VPS33AQ96AX1 596 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SLC35G5Q96KT7 338 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF597Q96LX8 424 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PANX1Q96RD7 426 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 NODALQ96S42 347 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 BARD1Q99728 777 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 LMF2Q9BU23 707 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CCDC28BQ9BUN5 200 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 OSBPL11Q9BXB4 747 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 TMEM120AQ9BXJ8 343 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SDR39U1Q9NRG7 319 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 ZIM2Q9NZV7 527 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CNIH4Q9P003 139 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SEC14L3Q9UDX4 400 aa6.33□□□□□ -1.4
BRCA1-215ENST00000478531 CNOT11Q9UKZ1 510 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 BOKQ9UMX3 212 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 FAF1Q9UNN5 650 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.33□□□□□ -1.4
BRCA1-215ENST00000478531 PCNX3Q9H6A9 2034 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 PRAMEF25A6NGN4 478 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 OR6C70A6NIJ9 312 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 NR5A2O00482 541 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 GNB5O14775 395 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SCO2O43819 266 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 TSPAN2O60636 221 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SCN2BO60939 215 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms