RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ABCG2Q9UNQ0 655 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 HIVEP1P15822 2718 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 A0A087WV62 115 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CASKO14936 926 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 RCBTB2O95199 551 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 RAF1P04049 648 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CRHP06850 196 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 GRK2P25098 689 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 PTGDSP41222 190 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 NCBP2P52298 156 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 SRYQ05066 204 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CEBPEQ15744 281 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 BCL2A1Q16548 175 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 DECR1Q16698 335 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CCDC153Q494R4 210 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CYP27C1Q4G0S4 372 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 FAM180BQ6P0A1 224 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 PAMR1Q6UXH9 720 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 CDC20BQ86Y33 519 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 SLC44A2Q8IWA5 706 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 WDSUB1Q8N9V3 476 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 RDH11Q8TC12 318 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 KAT2AQ92830 837 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 METTL2AQ96IZ6 378 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 TUBA1CQ9BQE3 449 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 EPB41L4BQ9H329 900 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 MID2Q9UJV3 735 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 PACSIN3Q9UKS6 424 aa13.13□□□□□ -0.31
SMARCE1-209ENST00000478349 HCFC1P51610 2035 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 TSPAN2O60636 221 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 RSL1D1O76021 490 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 IFI6P09912 130 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CT45A8P0DMV1 189 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CT45A9P0DMV2 189 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 PEPDP12955 493 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 DPP4P27487 766 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CCT5P48643 541 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 GFRA1P56159 465 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CORO7P57737 925 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 DUSP2Q05923 314 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 BTKQ06187 659 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 KEAP1Q14145 624 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CT45A2Q5DJT8 189 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 TGIF2LYQ8IUE0 185 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 C9orf106Q8NAJ2 232 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 NRGNQ92686 78 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 APIPQ96GX9 242 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 DACH2Q96NX9 599 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 MYNNQ9NPC7 610 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 JKAMPQ9P055 326 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 SPG11Q96JI7 2443 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
SMARCE1-209ENST00000478349 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 PLOD2O00469 737 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 CHN1P15882 459 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 ZNF708P17019 499 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 EVI2BP34910 448 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 HTR6P50406 440 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 LHX2P50458 406 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 C2orf80Q0P641 193 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 VPS26BQ4G0F5 336 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 ADGRE4PQ86SQ3 457 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 CCDC63Q8NA47 563 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 ZFP28Q8NHY6 868 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 GSTO2Q9H4Y5 243 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 TAS2R7Q9NYW3 318 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 CLCF1Q9UBD9 225 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 EIF3LQ9Y262 564 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
SMARCE1-209ENST00000478349 UQCRHLA0A096LP55 91 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 MYO1GB0I1T2 1018 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 SCO2O43819 266 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 KCNH1O95259 989 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 CHEK2O96017 543 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 JUNP05412 331 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 NEFHP12036 1026 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 FCGR2AP12318 317 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 GCAP28676 217 aa13.1□□□□□ -0.31
SMARCE1-209ENST00000478349 MC3RP41968 323 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms