RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PSMD7P51665 324 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ARFIP1P53367 373 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 METAP1P53582 386 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 UGT2B15P54855 530 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 CASP9P55211 416 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 RPS3AP61247 264 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SNRPGP62308 76 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 CDK3Q00526 305 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF45Q02386 682 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 DMPKQ09013 629 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ST3GAL4Q11206 333 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MAP4K2Q12851 820 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ILKQ13418 452 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SMAD4Q13485 552 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 GNA13Q14344 377 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PTGES3Q15185 160 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NDUFA9Q16795 377 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SYT16Q17RD7 645 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF181Q2M3W8 571 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF404Q494X3 552 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SPDYE7PQ495Y7 208 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM35AQ53FP2 167 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ARMCX4Q5H9R4 360 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 DCST1Q5T197 706 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 AGAP7PQ5VUJ5 663 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MEDAGQ5VYS4 303 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SLX4IPQ5VYV7 408 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM236Q5W0B7 351 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 METRNLQ641Q3 311 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 FRMPD2BQ6IN97 320 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF770Q6IQ21 691 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PNCKQ6P2M8 343 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 Q6ZPB1 254 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PTCHD4Q6ZW05 846 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 C6orf120Q7Z4R8 191 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TRIM69Q86WT6 500 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 HEATR4Q86WZ0 1026 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 KRT73Q86Y46 540 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 EGFL6Q8IUX8 553 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MMAAQ8IVH4 418 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ADGRF3Q8IZF5 1079 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 HORMAD2Q8N7B1 307 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM105Q8N8V8 129 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 LMNTD1Q8N9Z9 388 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZBTB8BQ8NAP8 495 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF740Q8NDX6 193 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 OR52J3Q8NH60 311 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SFXN5Q8TD22 340 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 RNF141Q8WVD5 230 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 APOBEC4Q8WW27 367 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SMG7Q92540 1137 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NR4A3Q92570 626 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 RPL3LQ92901 407 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SMARCD2Q92925 531 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MOAP1Q96BY2 351 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 RSPRY1Q96DX4 576 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM19Q96HH6 336 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SLC35G5Q96KT7 338 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF354BQ96LW1 612 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 LRRC3BQ96PB8 259 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 F2RL3Q96RI0 385 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NIPSNAP1Q9BPW8 284 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 G6PC3Q9BUM1 346 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SPATA5L1Q9BVQ7 753 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 FAIM2Q9BWQ8 316 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SORBS1Q9BX66 1292 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 RAB11FIP5Q9BXF6 653 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 CDCA4Q9BXL8 241 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ASPNQ9BXN1 380 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF717Q9BY31 904 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 UCK2Q9BZX2 261 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PRDM14Q9GZV8 571 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NXF2Q9GZY0 626 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM245Q9H330 911 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 DSN1Q9H410 356 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SP140LQ9H930 580 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NMNAT1Q9HAN9 279 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SIRT3Q9NTG7 399 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MS4A12Q9NXJ0 267 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TAS2R7Q9NYW3 318 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 EHD3Q9NZN3 535 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SELENONQ9NZV5 590 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 NCDNQ9UBB6 729 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 P2RX2Q9UBL9 471 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MKLN1Q9UL63 735 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PLAGL1Q9UM63 463 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM98Q9Y2Y6 226 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 UGT2A1Q9Y4X1 527 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PCDHGA3Q9Y5H0 932 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SNX8Q9Y5X2 465 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PEX16Q9Y5Y5 336 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TEP1Q99973 2627 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 DMXL1Q9Y485 3027 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 FANCMQ8IYD8 2048 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 A0A0A6YYD5 115 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TRBV4-1A0A0J9YWV2 114 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PNMA8CA0A1B0GUJ8 204 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms