RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SH3BGRLO75368 114 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ALX3O95076 343 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 NTN1O95631 604 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 TGFB1P01137 390 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 HK1P19367 917 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 TPSB2P20231 275 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 IL32P24001 234 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 GRK2P25098 689 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 SSR2P43308 183 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PDLIM4P50479 330 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PLCXD2Q0VAA5 305 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 SNX1Q13596 522 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 TPSAB1Q15661 275 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 SGCBQ16585 318 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ZSWIM7Q19AV6 140 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C11orf91Q3C1V1 193 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 HSP90AA5PQ58FG0 334 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 RAET1LQ5VY80 246 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 MRM1Q6IN84 353 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C4orf22Q6V702 233 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 Q6ZSR9 355 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 GGNQ86UU5 652 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 CCDC25Q86WR0 208 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 FBXL14Q8N1E6 418 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ZCCHC7Q8N3Z6 543 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 FADS6Q8N9I5 356 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C2CD4AQ8NCU7 369 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 NUP43Q8NFH3 380 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 OR5M1Q8NGP8 315 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 CALML6Q8TD86 181 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF418Q8TF45 676 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 TMCO6Q96DC7 493 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 DTNBP1Q96EV8 351 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PTCD3Q96EY7 689 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 SLC35A4Q96G79 324 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 COL21A1Q96P44 957 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PIMREGQ9BSJ6 248 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ITPAQ9BY32 194 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C20orf96Q9NUD7 363 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 NPAP1Q9NZP6 1156 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PHF11Q9UIL8 331 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PCDHB10Q9UN67 800 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 PACSIN2Q9UNF0 486 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ASB4Q9Y574 426 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 AP4B1Q9Y6B7 739 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 UQCRHLA0A096LP55 91 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 LRP5LA4QPB2 252 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 SDR42E2A6NKP2 422 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 H3BML4 177 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 PGRMC2O15173 223 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 TMPRSS11DO60235 418 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 RGS9O75916 674 aaPredicted RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 ADAP00813 363 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 AHSGP02765 367 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 COL6A2P12110 1019 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 DRD5P21918 477 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 AGTR1P30556 359 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 IL2RGP31785 369 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 LIMS1P48059 325 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 MGAT2Q10469 447 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 KIF5AQ12840 1032 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 ITGADQ13349 1161 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 E2F2Q14209 437 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 IQCCQ4KMZ1 466 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 FBLN7Q53RD9 439 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 KHDRBS2Q5VWX1 349 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 TFAP2EQ6VUC0 442 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 B3GLCTQ6Y288 498 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 TBC1D1Q86TI0 1168 aaPredicted RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 AGGF1Q8N302 714 aaeCLIP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 UBL4BQ8N7F7 174 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 LINC01356Q8N9X3 169 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 MCUQ8NE86 351 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 OR2M3Q8NG83 312 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 OR4K17Q8NGC6 315 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 OR52B6Q8NGF0 335 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 HPS1Q92902 700 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 KISS1RQ969F8 398 aaPredicted RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 NXNL1Q96CM4 212 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 ADGRG7Q96K78 797 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 BTBD9Q96Q07 612 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 EGFL8Q99944 293 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 EFCAB11Q9BUY7 163 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF717Q9BY31 904 aaPredicted RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 POTEKPQ9BYX7 375 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 PRRG4Q9BZD6 226 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 BPESC1Q9GZL8 116 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 DDX47Q9H0S4 455 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 OR51B5Q9H339 312 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 DSN1Q9H410 356 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 IARS2Q9NSE4 1012 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 VWA7Q9Y334 891 aa6.47□□□□□ -1.37
SPTLC1-205ENST00000477888 hCG_2014768A0A024R1R8 64 aa6.46□□□□□ -1.38
SPTLC1-205ENST00000477888 SERTM1A2A2V5 107 aa6.46□□□□□ -1.38
SPTLC1-205ENST00000477888 MIF4GDA9UHW6 222 aaKnown RBP6.46□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF814B7Z6K7 855 aa6.46□□□□□ -1.38
SPTLC1-205ENST00000477888 AKR1B15C9JRZ8 316 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms