RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PSPHP78330 225 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 KRT72Q14CN4 511 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 LINC00303Q3SY05 128 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 COX20Q5RI15 118 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 OPN5Q6U736 354 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 SLC34A3Q8N130 599 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 HORMAD2Q8N7B1 307 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 OR52N2Q8NGI0 321 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 MIPOL1Q8TD10 442 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 TM9SF4Q92544 642 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 PIK3R3Q92569 461 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ROPN1LQ96C74 230 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 LRRC58Q96CX6 371 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 OMA1Q96E52 524 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ANKRD27Q96NW4 1050 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 TRIM8Q9BZR9 551 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ADNPQ9H2P0 1102 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 PIGUQ9H490 435 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 DUSP22Q9NRW4 184 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 ANKRD10Q9NXR5 420 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 CORO2BQ9UQ03 480 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 TP53TG5Q9Y2B4 290 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 BSNQ9UPA5 3926 aa14.14□□□□□ -0.15
SEC13-215ENST00000477547 GXYLT2A0PJZ3 443 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 A8MVJ9 347 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 ASNA1O43681 348 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 OR6B1O95007 311 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 UNC5CO95185 931 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 WDPCPO95876 746 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 IL12BP29460 328 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 CRATP43155 626 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 RFX3P48380 749 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 MAN2A2P49641 1150 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 MVDP53602 400 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 POU6F2P78424 691 aaPredicted RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 ARG2P78540 354 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 TXNL4AP83876 142 aaKnown RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 OC90Q02509 493 aaPredicted RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 FADDQ13158 208 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 ART3Q13508 389 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 PIGGQ5H8A4 983 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 CYP4Z2PQ8N1L4 340 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 SLC15A4Q8N697 577 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 OR4N2Q8NGD1 307 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 C9orf43Q8TAL5 461 aaPredicted RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 RAB8BQ92930 207 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 TMBIM1Q969X1 311 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 SPACA9Q96E40 222 aaPredicted RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 ABHD17AQ96GS6 310 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 RNF32Q9H0A6 362 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 IKZF5Q9H5V7 419 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 EFCAB1Q9HAE3 211 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 ZBTB20Q9HC78 741 aaPredicted RBP14.13□□□□□ -0.15
SEC13-215ENST00000477547 HPF1Q9NWY4 346 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 GIN1Q9NXP7 522 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 STMN3Q9NZ72 180 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 TUBD1Q9UJT1 453 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 CBLCQ9ULV8 474 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 ZNF451Q9Y4E5 1061 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 NPFFR2Q9Y5X5 522 aa14.13□□□□□ -0.15
SEC13-215ENST00000477547 C15orf38-AP3S2A0A0A6YYH1 394 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 OR5H15A6NDH6 313 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 DUXAA6NLW8 204 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 EVPLLA8MZ36 301 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 PPM1BO75688 479 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 UBOX5O94941 541 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 AGR2O95994 175 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 NPPAP01160 153 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 PDGFAP04085 211 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 FBXO45P0C2W1 286 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 OR12D1P0DN82 309 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 ESRRAP11474 423 aaPredicted RBP14.12□□□□□ -0.15
SEC13-215ENST00000477547 ETFAP13804 333 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 PIGAP37287 484 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 MAGEA8P43361 318 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 HLCSP50747 726 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 DSTNP60981 165 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 MRPS22P82650 360 aaKnown RBP14.12□□□□□ -0.15
SEC13-215ENST00000477547 MXRA7P84157 204 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 TUBA3CQ13748 450 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 SELPLGQ14242 412 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 DECR1Q16698 335 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 CYP27C1Q4G0S4 372 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 RUNDC3AQ59EK9 446 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 ATAD3BQ5T9A4 648 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 ZNF468Q5VIY5 522 aaPredicted RBP14.12□□□□□ -0.15
SEC13-215ENST00000477547 TUBA3EQ6PEY2 450 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 LYPD8Q6UX82 237 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 HACD2Q6Y1H2 254 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 C16orf62Q7Z3J2 963 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 ARPINQ7Z6K5 226 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 GPALPP1Q8IXQ4 340 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 FAM13CQ8NE31 585 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 EFHD2Q96C19 240 aaPredicted RBP14.12□□□□□ -0.15
SEC13-215ENST00000477547 BTBD2Q9BX70 525 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
SEC13-215ENST00000477547 EXD2Q9NVH0 621 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 PLA2G3Q9NZ20 509 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 PCDHGB7Q9Y5F8 929 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms