RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 UBE2E3Q969T4 207 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 NXNL1Q96CM4 212 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 CNRIP1Q96F85 164 aaPredicted RBP8.75□□□□□ -1.01
COL4A5-204ENST00000477429 PBKQ96KB5 322 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 ZNF681Q96N22 645 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 RBBP8Q99708 897 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 BRINP2Q9C0B6 783 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 ACBD3Q9H3P7 528 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 DSN1Q9H410 356 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 NUDT4Q9NZJ9 180 aa8.75□□□□□ -1.01
COL4A5-204ENST00000477429 GPR55Q9Y2T6 319 aaPredicted RBP8.75□□□□□ -1.01
COL4A5-204ENST00000477429 MAGED1Q9Y5V3 778 aaPredicted RBP8.75□□□□□ -1.01
COL4A5-204ENST00000477429 CADP27708 2225 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 OR2M5A3KFT3 312 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 OR7A17O14581 309 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 SCO2O43819 266 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 ERAL1O75616 437 aaKnown RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 REM1O75628 298 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 CD8AP01732 235 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 DRD5P21918 477 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 SERPINB1P30740 379 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PPICP45877 212 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 BCL2A1Q16548 175 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PRSS53Q2L4Q9 553 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PGGHGQ32M88 737 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 ALKBH2Q6NS38 261 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 SLC48A1Q6P1K1 146 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 AAGABQ6PD74 315 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 RPS27LQ71UM5 84 aaKnown RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 GOLGA7Q7Z5G4 137 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 NUDT13Q86X67 352 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 SLC35F6Q8N357 371 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 FADS6Q8N9I5 356 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 C7orf57Q8NEG2 295 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 OR2M3Q8NG83 312 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 OR52B6Q8NGF0 335 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 GRK7Q8WTQ7 553 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 KCTD4Q8WVF5 259 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 EFHD2Q96C19 240 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 TM4SF18Q96CE8 201 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 LRRC39Q96DD0 335 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 ZBED6CLQ96FA7 236 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 SLC35A4Q96G79 324 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 NSUN5Q96P11 429 aaKnown RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 COL21A1Q96P44 957 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 TRIM31Q9BZY9 425 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 CXorf56Q9H5V9 222 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 FARSBQ9NSD9 589 aaKnown RBP8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PSD3Q9NYI0 1048 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 MED11Q9P086 117 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 DKKL1Q9UK85 242 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PROCRQ9UNN8 238 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PPP2R2CQ9Y2T4 447 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 PCDHA9Q9Y5H5 950 aa8.74□□□□□ -1.01
COL4A5-204ENST00000477429 IGHV4-30-2A0A087WSY4 118 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 HMX2A2RU54 273 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 OR6C70A6NIJ9 312 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 PPP6CO00743 305 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ACOX3O15254 700 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 KERAO60938 352 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 CDH16O75309 829 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 TNFRSF21O75509 655 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 SEC31AO94979 1220 aaKnown RBP8.73□□□□□ -1.01
COL4A5-204ENST00000477429 OPN1LWP04000 364 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ATP1B1P05026 303 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 STMN1P16949 149 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 SLC12A2P55011 1212 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ARL4CP56559 192 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 RAB10P61026 200 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 RPS4XP62701 263 aaKnown RBP8.73□□□□□ -1.01
COL4A5-204ENST00000477429 GALNT1Q10472 559 aaPredicted RBP8.73□□□□□ -1.01
COL4A5-204ENST00000477429 PFKFB4Q16877 469 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 OR2A2Q6IF42 318 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 MFSD12Q6NUT3 480 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 GGNQ86UU5 652 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 KLHL7Q8IXQ5 586 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ZBED8Q8IZ13 594 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 L3MBTL4Q8NA19 623 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 STAG3L4Q8TBR4 150 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 HTRA1Q92743 480 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 KAT2AQ92830 837 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 VSTM2LQ96N03 204 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 GPR78Q96P69 363 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 BTBD9Q96Q07 612 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 SLC39A3Q9BRY0 314 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 ACTR6Q9GZN1 396 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 WDR41Q9HAD4 459 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 PLSCR4Q9NRQ2 329 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 RNF14Q9UBS8 474 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 EGFL7Q9UHF1 273 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 LIPT1Q9Y234 373 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 MRPS18CQ9Y3D5 142 aaKnown RBP8.73□□□□□ -1.01
COL4A5-204ENST00000477429 JRKLQ9Y4A0 524 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
COL4A5-204ENST00000477429 TCRBV9S1A1TA0A576 114 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 FAM159BA6NKW6 160 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms