RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 YIPF5Q969M3 257 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PHF21AQ96BD5 680 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 SLC41A3Q96GZ6 507 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ZIM3Q96PE6 472 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 FAM213AQ9BRX8 229 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ZNF577Q9BSK1 485 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 TIPINQ9BVW5 301 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 SPATA16Q9BXB7 569 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 NLNQ9BYT8 704 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 RTN4RQ9BZR6 473 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PKIBQ9C010 78 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 DNTTIP1Q9H147 329 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ALX4Q9H161 411 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 PLEKHA4Q9H4M7 779 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 RNF41Q9H4P4 317 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 RGCCQ9H4X1 137 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 AUNIPQ9H7T9 357 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 RNPEPL1Q9HAU8 725 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 NMUR1Q9HB89 426 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 MYOZ1Q9NP98 299 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 ADAP2Q9NPF8 381 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 TIGARQ9NQ88 270 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 HINT3Q9NQE9 182 aaKnown RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 MAN2C1Q9NTJ4 1040 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 UFSP2Q9NUQ7 469 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PANK4Q9NVE7 773 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 MS4A12Q9NXJ0 267 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 STMN3Q9NZ72 180 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PDP1Q9P0J1 537 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 KLHL8Q9P2G9 620 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 WARS2Q9UGM6 360 aaKnown RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 HAO1Q9UJM8 370 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 OSGIN1Q9UJX0 560 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ADAM28Q9UKQ2 775 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 HSF4Q9ULV5 492 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 SCML1Q9UN30 329 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PSMD13Q9UNM6 376 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 KCNJ14Q9UNX9 436 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PLCL2Q9UPR0 1127 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ERVW-1Q9UQF0 538 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 WBP11Q9Y2W2 641 aaKnown RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 PRELID3BQ9Y3B1 194 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PYGO1Q9Y3Y4 419 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 L3MBTL1Q9Y468 752 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 SLC22A7Q9Y694 548 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PRDM15P57071 1507 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 RAPGEF2Q9Y4G8 1499 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 BCL9O00512 1426 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CLIP1P30622 1438 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NCAPD2Q15021 1401 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SMG6Q86US8 1419 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 ADGRL3Q9HAR2 1447 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PDS5BQ9NTI5 1447 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 EIF3AQ14152 1382 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 KIF21AQ7Z4S6 1674 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ZNF644Q9H582 1327 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 TRAV25A0A0B4J276 109 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ZCWPW2A0A1B0GU75 182 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 A0A1W2PPV4 95 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 A0A1W2PQ72 361 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 OOEPA6NGQ2 149 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 LIPT2A6NK58 231 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SMIM23A6NLE4 172 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PDZK1P1A8MUH7 402 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MEI4A8MW99 385 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TMEM238C9JI98 176 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NPIPA2E9PIF3 369 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 FOXE1O00358 373 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLC33A1O00400 549 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 HS3ST1O14792 307 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ADAMDEC1O15204 470 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NUPL2O15504 423 aaKnown RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 PPIP5K2O43314 1243 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HCN1O60741 890 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CTNSO60931 367 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SAP30O75446 220 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NXPH2O95156 264 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 VAMP5O95183 116 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 F10P00742 488 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CALCAP01258 141 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MT-ND2P03891 347 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CALB1P05937 261 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GPIP06744 558 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 GP1BAP07359 652 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 ABHD2P08910 425 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLC35E2BP0CK96 405 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SLC35E2P0CK97 266 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NQO2P16083 231 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 EPORP19235 508 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CNR1P21554 472 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CXCR2P25025 360 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PIK3R1P27986 724 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 TEAD1P28347 426 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 HSD11B1P28845 292 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SHC1P29353 583 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CRABP1P29762 137 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 AHRP35869 848 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SERPINB5P36952 375 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 PRKCIP41743 596 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 SYKP43405 635 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms