RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CFLARO15519 480 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 EMC8O43402 210 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 EDF1O60869 148 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 TRIM3O75382 744 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 NKX2-2O95096 273 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CPSF4O95639 269 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 HMGN2P05204 90 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 FREM3P0C091 2139 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CYP4B1P13584 511 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CD1EP15812 388 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 GABRA3P34903 492 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 MAGEA5P43359 124 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 KIR3DL1P43629 444 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 RFX3P48380 749 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CCT3P49368 545 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 TMED10P49755 219 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 PPIAP62937 165 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 KCNJ2P63252 427 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 GUCY1A3Q02108 690 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 PLGLB1Q02325 96 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 TP53BP2Q13625 1128 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 LASP1Q14847 261 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 DUSP5Q16690 384 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 PDCD4Q53EL6 469 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 MFSD12Q6NUT3 480 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 PAOXQ6QHF9 649 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CLEC18BQ6UXF7 455 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 GK5Q6ZS86 529 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 NUP54Q7Z3B4 507 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 PACS2Q86VP3 889 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 POGLUT1Q8NBL1 392 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CLEC18CQ8NCF0 446 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 OR9I1Q8NGQ6 314 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CEP70Q8NHQ1 597 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 SLC9A6Q92581 669 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 RILPQ96NA2 401 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 COL21A1Q96P44 957 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 MS4A4EQ96PG1 132 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 DOHHQ9BU89 302 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 ANGPTL4Q9BY76 406 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 RTN4RQ9BZR6 473 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 SERHL2Q9H4I8 314 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 IL1RL2Q9HB29 575 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 C3orf14Q9HBI5 128 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 ZCCHC3Q9NUD5 404 aaKnown RBP8.88□□□□□ -0.99
HDAC3-208ENST00000476739 GPATCH2Q9NW75 528 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 FBXO34Q9NWN3 711 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CNIH4Q9P003 139 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 CBLCQ9ULV8 474 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 OR10H1Q9Y4A9 318 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 KCNE3Q9Y6H6 103 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 POLEQ07864 2286 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 ZNF407Q9C0G0 2248 aa8.88□□□□□ -0.99
HDAC3-208ENST00000476739 GTF3C1Q12789 2109 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 A0A1B0GTH9 108 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 PRSS51A0A1B0GVH4 220 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 GNB5O14775 395 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 UBDO15205 165 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 CDC40O60508 579 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ICOSLGO75144 302 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 TGDSO95455 350 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 IDO1P14902 403 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 DDX5P17844 614 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 SOAT1P35610 550 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 CDKN2CP42773 168 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 MNAT1P51948 309 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 CLNS1AP54105 237 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 PNLIPRP2P54317 469 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 CASP9P55211 416 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 RPS26P62854 115 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 SF3A3Q12874 501 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 HYAL4Q2M3T9 481 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 KRTCAP3Q53RY4 240 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 FIGNL1Q6PIW4 674 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ZAR1Q86SH2 424 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 NATD1Q8N6N6 113 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 CDRT4Q8N9R6 151 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 OR4A15Q8NGL6 344 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 RFWD2Q8NHY2 731 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 GPR151Q8TDV0 419 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 RNF138Q8WVD3 245 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 JADE3Q92613 823 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 RMND5BQ96G75 393 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 GNRHR2Q96P88 292 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 SECISBP2Q96T21 854 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 INPP5KQ9BT40 448 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ZNF703Q9H7S9 590 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 METTL7AQ9H8H3 244 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ZDHHC11Q9H8X9 412 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 Q9N2J8 555 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 ZFP64Q9NPA5 681 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 TCF7L2Q9NQB0 619 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 SDR39U1Q9NRG7 319 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
HDAC3-208ENST00000476739 TNFRSF10DQ9UBN6 386 aa8.87□□□□□ -0.99
HDAC3-208ENST00000476739 SH3BGRL2Q9UJC5 107 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms