RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 F8W036 122 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 WNT9AO14904 365 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SLC22A5O76082 557 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 TP53P04637 393 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 DAPP51397 102 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 BLOC1S1P78537 153 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 HNRNPA0Q13151 305 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 GALEQ14376 348 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 CRTC1Q6UUV9 634 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM207Q6UWW9 146 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 BAIAP2L2Q6UXY1 529 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 C3P1Q6ZMU1 363 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SLC24A5Q71RS6 500 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 GID4Q8IVV7 300 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 LINC00518Q8N0U6 118 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 C11orf54Q9H0W9 315 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SLC32A1Q9H598 525 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 NDRG4Q9ULP0 352 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 HOXD4P09016 255 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 TDGQ13569 410 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 CDNFQ49AH0 187 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SYPL2Q5VXT5 272 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 WDR53Q7Z5U6 358 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 ISCA2Q86U28 154 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 MRPL41Q8IXM3 137 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 DPCDQ9BVM2 203 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 FAM120CQ9NX05 1096 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SCML1Q9UN30 329 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 ZFR2Q9UPR6 939 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 NUP205Q92621 2012 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 A0A1B0GVT2 93 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 H3BSH0 61 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SAP18O00422 153 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PRKYO43930 277 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 KIAA0513O60268 411 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SCAF4O95104 1147 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 H2BFMP0C1H6 154 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 H2AFB2P0C5Z0 115 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PRR35P0CG20 571 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 CHRNB4P30926 498 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 GGT2P36268 569 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF84P51523 738 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PAFAH1B3Q15102 231 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 TBCEQ15813 527 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 BRAT1Q6PJG6 821 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SLC22A25Q6T423 547 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PRSS42Q7Z5A4 293 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PGBD5Q8N414 524 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 NLGN4YQ8NFZ3 816 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 OR51G2Q8NGK0 314 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 FBXW5Q969U6 566 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PTERQ96BW5 349 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 TCEAL7Q9BRU2 100 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 KCNIP1Q9NZI2 227 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 GABRQQ9UN88 632 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PEX14O75381 377 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ACP5P13686 325 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 HLA-DMAP28067 261 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 HOXA9P31269 272 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ADH7P40394 386 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 TEKQ02763 1124 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SLC35F1Q5T1Q4 408 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 C12orf45Q8N5I9 185 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 WFIKKN2Q8TEU8 576 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ARL11Q969Q4 196 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 HYLS1Q96M11 299 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 MCHR1Q99705 422 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SRRQ9GZT4 340 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ATG5Q9H1Y0 275 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 WDR26Q9H7D7 661 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 FBRSQ9HAH7 460 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 DNAJC27Q9NZQ0 273 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 DIMT1Q9UNQ2 313 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SULT1C2O00338 296 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 CLEC2LP0C7M8 214 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 CDK2P24941 298 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 KIR2DL3P43628 341 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF41P51814 821 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ACTC1P68032 377 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ACTA1P68133 377 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 RBM39Q14498 530 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PPA1Q15181 289 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM41BQ5BJD5 291 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 CPZQ66K79 652 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 DPY19L4Q7Z388 723 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms