RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 NPSR1Q6W5P4 371 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.33
COL2A1-205ENST00000474996 P4HA3Q7Z4N8 544 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 CXorf67Q86X51 503 aaPredicted RBP13□□□□□ -0.33
COL2A1-205ENST00000474996 TMEM151AQ8N4L1 468 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 EXOSC8Q96B26 276 aaKnown RBP13□□□□□ -0.33
COL2A1-205ENST00000474996 EFHD2Q96C19 240 aaPredicted RBP13□□□□□ -0.33
COL2A1-205ENST00000474996 DTNBP1Q96EV8 351 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 VSTM2LQ96N03 204 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 C6orf203Q9P0P8 240 aaPredicted RBP13□□□□□ -0.33
COL2A1-205ENST00000474996 NDRG3Q9UGV2 375 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 MCM8Q9UJA3 840 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 MRPS18CQ9Y3D5 142 aaKnown RBP13□□□□□ -0.33
COL2A1-205ENST00000474996 ARID1AO14497 2285 aa13□□□□□ -0.33
COL2A1-205ENST00000474996 GNG14A0A1W2PPG7 69 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 MSTNO14793 375 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 SUPT7LO94864 414 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 SLU7O95391 586 aaKnown RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 KRT6AP02538 564 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 KRT6BP04259 564 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 CTAGE8P0CG41 777 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 HSD3B1P14060 373 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 HSD3B2P26439 372 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 KRT6CP48668 564 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 PNLIPRP2P54317 469 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 GAS1P54826 345 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 B3GALT5-AS1P59052 145 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 EEF1A1P68104 462 aaKnown RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 RAE1P78406 368 aaKnown RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 FAM27E3Q08E93 113 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 CSTF3Q12996 717 aaKnown RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 EEF1A1P5Q5VTE0 462 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 CLEC9AQ6UXN8 241 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 SLC44A2Q8IWA5 706 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 CTAGE4Q8IX94 777 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 UBQLNLQ8IYU4 475 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 GBP7Q8N8V2 638 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 OR4N2Q8NGD1 307 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 RNF138Q8WVD3 245 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 ERP27Q96DN0 273 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 ACPTQ9BZG2 426 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 FOLH1BQ9HBA9 442 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 PCNX3Q9H6A9 2034 aa12.99□□□□□ -0.33
COL2A1-205ENST00000474996 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-205ENST00000474996 SLC22A20A6NK97 555 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 SIAH2O43255 324 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 SCO2O43819 266 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 HTR6P50406 440 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 RASA2Q15283 850 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 UNC50Q53HI1 259 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 VWA1Q6PCB0 445 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 GPRIN3Q6ZVF9 776 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 SAMD14Q8IZD0 417 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-205ENST00000474996 MMGT1Q8N4V1 131 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 OR7G2Q8NG99 324 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 OR4K17Q8NGC6 315 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 C16orf78Q8WTQ4 265 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 STARD4Q96DR4 205 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 APIPQ96GX9 242 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 WFIKKN1Q96NZ8 548 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 SLC35C2Q9NQQ7 365 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 GIMAP4Q9NUV9 329 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 KLHL28Q9NXS3 571 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 PPP4R1LQ9P1A2 415 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 ZNF180Q9UJW8 692 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
COL2A1-205ENST00000474996 DEFB108AA8MXU0 73 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 H0YC42 278 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 PLOD3O60568 738 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ULK1O75385 1050 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 CRHP06850 196 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 HMOX2P30519 316 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 TIA1P31483 386 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 EVI2BP34910 448 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 DSCR4P56555 118 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 SIRPAP78324 504 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 PSPHP78330 225 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ACSM2AQ08AH3 577 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ZNF155Q12901 538 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 HEPACAMQ14CZ8 416 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 Q5PR19 223 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ZNF678Q5SXM1 525 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ACSM2BQ68CK6 577 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 OR2A2Q6IF42 318 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-205ENST00000474996 BTLAQ7Z6A9 289 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 P3H2Q8IVL5 708 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 FAM9CQ8IZT9 166 aa12.97□□□□□ -0.33
COL2A1-205ENST00000474996 FADS6Q8N9I5 356 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms