RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 GSTA1P08263 222 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 ANXA4P09525 319 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-210ENST00000472880 TCEA1P23193 301 aaKnown RBP17.93■□□□□ 0.46
COL9A3-210ENST00000472880 GRK2P25098 689 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 LHX2P50458 406 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 PNLIPRP2P54317 469 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 ZNF763Q0D2J5 394 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 FOXF2Q12947 444 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 OR5M10Q6IEU7 315 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 GALNT18Q6P9A2 607 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 CAMKMTQ7Z624 323 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 ADGRE4PQ86SQ3 457 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 LUZP2Q86TE4 346 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 GRAMD2AQ8IUY3 354 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 GCNT2Q8N0V5 402 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 OR7G2Q8NG99 324 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 OR4K17Q8NGC6 315 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 ACMSDQ8TDX5 336 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 EFHD2Q96C19 240 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-210ENST00000472880 INTS12Q96CB8 462 aaKnown RBP17.93■□□□□ 0.46
COL9A3-210ENST00000472880 UCN2Q96RP3 112 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 RHOXF2Q9BQY4 288 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 GALNT8Q9NY28 637 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 PSMC3IPQ9P2W1 217 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-210ENST00000472880 CLCF1Q9UBD9 225 aa17.93■□□□□ 0.46
COL9A3-210ENST00000472880 PLOD2O00469 737 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 RAF1P04049 648 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 KLK2P20151 261 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 CHMP24386 653 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 STARP49675 285 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 IMPG1Q17R60 797 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 PLXDC2Q6UX71 529 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 CCNYL1Q8N7R7 359 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 MBD6Q96DN6 1003 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 PIGMQ9H3S5 423 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 GSTO2Q9H4Y5 243 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 L2HGDHQ9H9P8 463 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 MID1IP1Q9NPA3 183 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 MIEF1Q9NQG6 463 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 PPP4R1LQ9P1A2 415 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 ITPR3Q14573 2671 aa17.92■□□□□ 0.46
COL9A3-210ENST00000472880 ZNF708P17019 499 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 DDCP20711 480 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 DPP4P27487 766 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 NCBP2P52298 156 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL9A3-210ENST00000472880 DIO3P55073 304 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 CLDN18P56856 261 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 EEF1A1P68104 462 aaKnown RBP17.91■□□□□ 0.46
COL9A3-210ENST00000472880 GAB1Q13480 694 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 KEAP1Q14145 624 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 EEF1A1P5Q5VTE0 462 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 CNPY4Q8N129 248 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 OR4N2Q8NGD1 307 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 RNF138Q8WVD3 245 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 CCDC126Q96EE4 140 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 C11orf24Q96F05 449 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-210ENST00000472880 G6PC3Q9BUM1 346 aa17.91■□□□□ 0.46
COL9A3-210ENST00000472880 RPH3AQ9Y2J0 694 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-210ENST00000472880 MRPS18CQ9Y3D5 142 aaKnown RBP17.91■□□□□ 0.46
COL9A3-210ENST00000472880 SETD2Q9BYW2 2564 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-210ENST00000472880 HRNRQ86YZ3 2850 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-210ENST00000472880 MED12Q93074 2177 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 MTORP42345 2549 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 SERTM1A2A2V5 107 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 SCO2O43819 266 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 SLITRK5O94991 958 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 JUNP05412 331 aaKnown RBP17.9■□□□□ 0.46
COL9A3-210ENST00000472880 PYGBP11216 843 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 NTSP30990 170 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 EVI2BP34910 448 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 MC3RP41968 323 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 DSCR4P56555 118 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-210ENST00000472880 C2orf80Q0P641 193 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 SH2D4BQ5SQS7 431 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 CHMP1BQ7LBR1 199 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 P4HA3Q7Z4N8 544 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 DACH2Q96NX9 599 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 SIRT5Q9NXA8 310 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 TBK1Q9UHD2 729 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 DCDC2Q9UHG0 476 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 PACSIN3Q9UKS6 424 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 AKAP6Q13023 2319 aa17.9■□□□□ 0.46
COL9A3-210ENST00000472880 PRRC2AP48634 2157 aaKnown RBP17.89■□□□□ 0.45
COL9A3-210ENST00000472880 A0A087WV62 115 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 SH3D21A4FU49 640 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 MYO1GB0I1T2 1018 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 HCRTR2O43614 444 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 GLRA3O75311 464 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 CRCPO75575 148 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 MYL2P10916 166 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 CPOXP36551 454 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 GAS1P54826 345 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 FOXA1P55317 472 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 PSG6Q00889 435 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 FOXD4Q12950 439 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-210ENST00000472880 TMEM107Q6UX40 140 aa17.89■□□□□ 0.45
COL9A3-210ENST00000472880 DDX18Q9NVP1 670 aaKnown RBP17.89■□□□□ 0.45
COL9A3-210ENST00000472880 GRID1Q9ULK0 1009 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms