RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RPL32P62910 135 aaKnown RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 OC90Q02509 493 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 EGFEM1PQ0D2K5 195 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 DAZ2Q13117 558 aaKnown RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 MPPED2Q15777 294 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 CAMK4Q16566 473 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 CLPPQ16740 277 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF630Q2M218 657 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 OR2B11Q5JQS5 317 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 METTL11BQ5VVY1 283 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF57Q68EA5 555 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 HIST2H2AA3Q6FI13 130 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 SULT1C3Q6IMI6 304 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 CXCL17Q6UXB2 119 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 DPY19L2P2Q6ZN68 376 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 TRPM8Q7Z2W7 1104 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 RANBP3LQ86VV4 465 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 CSNK1A1LQ8N752 337 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 MLKLQ8NB16 471 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 COLGALT1Q8NBJ5 622 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 GOT1L1Q8NHS2 421 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 FBXO30Q8TB52 745 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF721Q8TF20 911 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 DCUN1D4Q92564 292 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 BCL2L2Q92843 193 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 DLX4Q92988 240 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 PSMG2Q969U7 264 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 C18orf25Q96B23 403 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 NOL4LQ96MY1 436 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 SMIM14Q96QK8 99 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ADPGKQ9BRR6 497 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 RTBDNQ9BSG5 229 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 NICN1Q9BSH3 213 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ABCG8Q9H221 673 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 GLIPR2Q9H4G4 154 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ZWILCHQ9H900 591 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 COPS7BQ9H9Q2 264 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 GRPEL1Q9HAV7 217 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 DAZ3Q9NR90 486 aaKnown RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 ELOVL2Q9NXB9 296 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 TRPC4Q9UBN4 977 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 MIOXQ9UGB7 285 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 MAD2L2Q9UI95 211 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 FBXW2Q9UKT8 454 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 STX8Q9UNK0 236 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 PRG3Q9Y2Y8 225 aaPredicted RBP0.85□□□□□ -2.27
UBXN4-207ENST00000471246 UNC79Q9P2D8 2635 aa0.85□□□□□ -2.27
UBXN4-207ENST00000471246 NPC1L1Q9UHC9 1359 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 LTBP1Q14766 1721 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DOCK9Q9BZ29 2069 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 DHRS7CA6NNS2 312 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 NPIPA2E9PIF3 369 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 H3BMH7 237 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ABCD4O14678 606 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CHEK1O14757 476 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SLC7A4O43246 635 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 BUB1O43683 1085 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TBL1XO60907 577 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 FOXH1O75593 365 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 WISP3O95389 354 aaPredicted RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SYNGR4O95473 234 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TIMP1P01033 207 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SEMG1P04279 462 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 HSP90AA1P07900 732 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 IGFBP1P08833 259 aaPredicted RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 STSP08842 583 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 HIST1H2AGP0C0S8 130 aaPredicted RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TOP1P11387 765 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF44P15621 663 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 RPS2P15880 293 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 GABRR1P24046 479 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TMOD1P28289 359 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CTNNB1P35222 781 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 NSFP46459 744 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PITPNBP48739 271 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 GPC3P51654 580 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CCL11P51671 97 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 NME5P56597 212 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 RPS6P62753 249 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 NOP14P78316 857 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 OTUD4Q01804 1114 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 UBXN1Q04323 297 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 TLE4Q04727 773 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 RCN2Q14257 317 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ELAVL3Q14576 367 aaKnown RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SLMAPQ14BN4 828 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 RAB35Q15286 201 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF699Q32M78 642 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 AARDQ4LEZ3 155 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 GLRA4Q5JXX5 417 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 EOGTQ5NDL2 527 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 CYB5R2Q6BCY4 276 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 ASPHD2Q6ICH7 369 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 OR5M10Q6IEU7 315 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PNCKQ6P2M8 343 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 BNIPLQ7Z465 357 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SYVN1Q86TM6 617 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 PPP1R27Q86WC6 154 aa0.84□□□□□ -2.27
UBXN4-207ENST00000471246 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.84□□□□□ -2.27
UBXN4-207ENST00000471246 SERPINA12Q8IW75 414 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms