RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PCSK2P16519 638 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 MAKP20794 623 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HTR7P34969 479 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GDF5P43026 501 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ACTBP60709 375 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ACTG1P63261 375 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TAP2Q03519 686 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PIN1Q13526 163 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HES1Q14469 280 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TXNDC8Q6A555 127 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ESPNLQ6ZVH7 1005 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PIM3Q86V86 326 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TCTE3Q8IZS6 198 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 IL17RDQ8NFM7 739 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OR9A2Q8NGT5 310 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SGK3Q96BR1 496 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ELMOD3Q96FG2 381 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 KLHDC7BQ96G42 594 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HDHD5Q9BXW7 423 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CWH43Q9H720 699 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 KIF25Q9UIL4 384 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 WIF1Q9Y5W5 379 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 IRS2Q9Y4H2 1338 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SMIM28A0A1B0GU29 152 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GABRDO14764 452 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA0513O60268 411 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 DEFA4P12838 97 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HOXA11P31270 313 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PRKCIP41743 596 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TGM4P49221 684 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 F2RL1P55085 397 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TAS2R31P59538 309 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SLC35A2P78381 396 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ELOCQ15369 112 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 COQ5Q5HYK3 327 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CCNJQ5T5M9 372 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 REEP3Q6NUK4 255 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SLC27A4Q6P1M0 643 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SHFQ7M4L6 423 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA0907Q7Z7F0 614 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 VWA5B2Q8N398 1253 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CMTM2Q8TAZ6 248 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PCED1BQ96HM7 432 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HNRNPABQ99729 332 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PAK1IP1Q9NWT1 392 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PISDQ9UG56 409 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM14AQ9Y6G1 99 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TSPAN11A1L157 253 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 BEST1O76090 585 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SNAPINO95295 136 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 FBXO45P0C2W1 286 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 G6PDP11413 515 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 F3P13726 295 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 EMP3P54852 163 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CLINT1Q14677 625 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF585AQ6P3V2 769 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SLC22A25Q6T423 547 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 Q6ZVU0 165 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 USP50Q70EL3 339 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 FAM185AQ8N0U4 392 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 OR1M1Q8NGA1 313 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 OR4K1Q8NGD4 311 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 C10orf82Q8WW14 230 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ALG3Q92685 438 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PRRC1Q96M27 445 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PREBQ9HCU5 417 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ACKR4Q9NPB9 350 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ZIM2Q9NZV7 527 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 FAAHO00519 579 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SLC22A2O15244 555 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 AP1G1O43747 822 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 RFPL2O75678 378 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CNTN5O94779 1100 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 BMP4P12644 408 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 HTRA4P83105 476 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 BEX5Q5H9J7 111 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 VARS2Q5ST30 1063 aaKnown RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 DBX2Q6ZNG2 339 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 ADGRA1Q86SQ6 560 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PACRGLQ8N7B6 248 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA1958Q8N8K9 716 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CNEP1R1Q8N9A8 125 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 OR4K13Q8NH42 304 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 UPRTQ96BW1 309 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 WWTR1Q9GZV5 400 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PADI3Q9ULW8 664 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PHRF1Q9P1Y6 1649 aaKnown RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 GJE1A6NN92 205 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 PMM2O15305 246 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 CLDN7O95471 211 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 OAS1P00973 400 aaKnown RBP6.56□□□□□ -1.36
BRCA1-210ENST00000471181 RAB3AP20336 220 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SFTPDP35247 375 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 NKX3-2P78367 333 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 SHEQ5VZ18 495 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 TMIGD1Q6UXZ0 262 aa6.56□□□□□ -1.36
BRCA1-210ENST00000471181 KBTBD6Q86V97 674 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms