RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PDK3Q15120 406 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 LRRC36Q1X8D7 754 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM83EQ2M2I3 478 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 MMEL1Q495T6 779 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 TBCELQ5QJ74 424 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 SH2D4BQ5SQS7 431 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF470Q6ECI4 717 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 VASNQ6EMK4 673 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 KLC3Q6P597 504 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 RNF111Q6ZNA4 994 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 PIWIL4Q7Z3Z4 852 aaKnown RBP8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZPLD1Q8TCW7 415 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 ATL1Q8WXF7 558 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 KCNJ9Q92806 393 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 UCN3Q969E3 161 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 SMIM10Q96HG1 83 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 GPR78Q96P69 363 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 BTBD9Q96Q07 612 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 AIF1LQ9BQI0 150 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 DOHHQ9BU89 302 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 ALOXE3Q9BYJ1 711 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRIM54Q9BYV2 358 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 WDR41Q9HAD4 459 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 EFCAB1Q9HAE3 211 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 EML4Q9HC35 981 aaKnown RBP8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 YAE1D1Q9NRH1 226 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 ADGRE2Q9UHX3 823 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 SH2B3Q9UQQ2 575 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 FIS1Q9Y3D6 152 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 TESMINQ9Y4I5 508 aa8.14□□□□□ -1.11
SYNGAP1-205ENST00000470232 C17orf105B2RV13 164 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 KDM4EB2RXH2 506 aaPredicted RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 B3GALT2O43825 422 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 RCBTB2O95199 551 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 RBP1P09455 135 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 LTA4HP09960 611 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 FREM3P0C091 2139 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 COX7A2P14406 83 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PPP2R1BP30154 601 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PCYT1AP49585 367 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PKNOX1P55347 436 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ATP5J2P56134 94 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PSME3P61289 254 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 MRPS22P82650 360 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SP140Q13342 867 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SERTAD2Q14140 314 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 RBBP5Q15291 538 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 TOMM20Q15388 145 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ETFDHQ16134 617 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF791Q3KP31 576 aaPredicted RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 TECRLQ5HYJ1 363 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 NHSL2Q5HYW2 709 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 TOR1AIP1Q5JTV8 583 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 RBM20Q5T481 1227 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PRAMEF20Q5VT98 475 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 FOXB2Q5VYV0 432 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ARMC3Q5W041 872 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SPATA6LQ8N4H0 392 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 CEP70Q8NHQ1 597 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 NUBPLQ8TB37 319 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PTPMT1Q8WUK0 201 aaPredicted RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC5A11Q8WWX8 675 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ABTB1Q969K4 478 aaPredicted RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SPACA9Q96E40 222 aaPredicted RBP8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 CCDC126Q96EE4 140 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF597Q96LX8 424 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SH3GL3Q99963 347 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 MED18Q9BUE0 208 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZBTB26Q9HCK0 441 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 SH2D2AQ9NP31 389 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 PDE10AQ9Y233 779 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 DYRK1BQ9Y463 629 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 NINQ8N4C6 2090 aa8.13□□□□□ -1.11
SYNGAP1-205ENST00000470232 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 A8MT66 165 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 A8MXE2 369 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 TMEM233B4DJY2 109 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 TP53I11O14683 189 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 UBDO15205 165 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CD5LO43866 347 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 HPNP05981 417 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM157CP0CG43 387 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CRYGSP22914 178 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ARNTP27540 789 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 IDUAP35475 653 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 HSPA13P48723 471 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CHN2P52757 468 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 ROR2Q01974 943 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 BIKQ13323 160 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 RUNX2Q13950 521 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CEACAM7Q14002 265 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CLEC12BQ2HXU8 276 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 LIN52Q52LA3 116 aa8.12□□□□□ -1.11
SYNGAP1-205ENST00000470232 C10orf62Q5T681 223 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms