RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ISPDA4D126 451 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SYT5O00445 386 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PLD2O14939 933 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SSX4O60224 188 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PIP5K1CO60331 668 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RASGRP1O95267 797 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MED26O95402 600 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RAB36O95755 333 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 DLGAP3O95886 979 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 GPR4P46093 362 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OMPP47874 163 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 ARFIP1P53367 373 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 TNFRSF17Q02223 184 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MXD1Q05195 221 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 CCNJQ5T5M9 372 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 USP30Q70CQ3 517 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SFTPA2Q8IWL1 248 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OR10G6Q8NH81 332 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 ADAMTS15Q8TE58 950 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PATE1Q8WXA2 126 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SIPA1Q96FS4 1042 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 TPK1Q9H3S4 243 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 LYARQ9NX58 379 aaKnown RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 KCMF1Q9P0J7 381 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SLC13A4Q9UKG4 626 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 STUB1Q9UNE7 303 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 DIMT1Q9UNQ2 313 aaKnown RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 UGT2A1Q9Y4X1 527 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 BRWD1Q9NSI6 2320 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 LOC105369274A0A096LPK9 316 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 LOC102723532A0A0G2JNH3 316 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 ASNA1O43681 348 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 UBXN7O94888 489 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 GNSP15586 552 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 POLR2CP19387 275 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 CPN2P22792 545 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MAGEA8P43361 318 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RPS15AP62244 130 aaKnown RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RGS1Q08116 209 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MLLT11Q13015 90 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RUNX2Q13950 521 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 NFATC4Q14934 902 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SPANXN2Q5MJ10 180 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SLC25A30Q5SVS4 291 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PRAMEF8Q5VWM4 474 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PRAMEF7Q5VXH5 474 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SDE2Q6IQ49 451 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MFSD12Q6NUT3 480 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SLC30A6Q6NXT4 461 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 PRSS41Q7RTY9 318 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OR4N4Q8N0Y3 316 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 LRRC25Q8N386 305 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OR52P1PQ8NH57 321 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 TEX47Q8TBZ9 253 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 TM9SF4Q92544 642 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 RNFT2Q96EX2 444 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OR2A14Q96R47 310 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 OR2A5Q96R48 311 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SP140LQ9H930 580 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SMURF1Q9HCE7 757 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 MRPS2Q9Y399 296 aaKnown RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 SPEGQ15772 3267 aa13.73□□□□□ -0.21
CBWD3-205ENST00000469687 TDRD6O60522 2096 aaKnown RBP13.73□□□□□ -0.21
CBWD3-205ENST00000469687 GSAPA4D1B5 854 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 SLC35G6P0C7Q6 338 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 CCNYL3P0C7X3 344 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 UGT2B7P16662 529 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 TNFSF8P32971 234 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ETV6P41212 452 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-205ENST00000469687 CDC20Q12834 499 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 TRAM2Q15035 370 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 DUSP5Q16690 384 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 HEPHL1Q6MZM0 1159 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 LINC00471Q8N535 108 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 TMEM163Q8TC26 289 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 GNPDA2Q8TDQ7 276 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 GPR151Q8TDV0 419 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ARSGQ96EG1 525 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ANKMY1Q9P2S6 941 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 SEC14L4Q9UDX3 406 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 HYKKA2RU49 373 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ZNF670-ZNF695F2Z2N8 137 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 RGS5O15539 181 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ATP6V1G1O75348 118 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ACADMP11310 421 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 GSTM3P21266 225 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 CTHP32929 405 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 KIAA1024LP59773 190 aa13.72□□□□□ -0.21
CBWD3-205ENST00000469687 DBPQ10586 325 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-205ENST00000469687 ST3GAL3Q11203 375 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms